RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 AVPR2P30518 371 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 HNF1BP35680 557 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 LIFRP42702 1097 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 TUBP50607 506 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 MVDP53602 400 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 TFF2Q03403 129 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 COL10A1Q03692 680 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 FOXF2Q12947 444 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 CAMK1Q14012 370 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 IL13RA2Q14627 380 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 AP5B1Q2VPB7 878 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 KIAA1614Q5VZ46 1190 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 ZNF474Q6S9Z5 364 aaPredicted RBP4.26□□□□□ -1.73
SKP1-212ENST00000523966 RNF144BQ7Z419 303 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 MDGA2Q7Z553 956 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 CNGA4Q8IV77 575 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 GHDCQ8N2G8 530 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 PAQR4Q8N4S7 273 aaPredicted RBP4.26□□□□□ -1.73
SKP1-212ENST00000523966 TNIP2Q8NFZ5 429 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 RFWD2Q8NHY2 731 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 FAM110DQ8TAY7 271 aaPredicted RBP4.26□□□□□ -1.73
SKP1-212ENST00000523966 ZCCHC10Q8TBK6 192 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 ZNF398Q8TD17 642 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 HDAC2Q92769 488 aaKnown RBP4.26□□□□□ -1.73
SKP1-212ENST00000523966 RNF125Q96EQ8 232 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 SEMA4CQ9C0C4 833 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 INTS2Q9H0H0 1204 aaKnown RBP4.26□□□□□ -1.73
SKP1-212ENST00000523966 SMC4Q9NTJ3 1288 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 FBXO4Q9UKT5 387 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 PNMA2Q9UL42 364 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 COX11Q9Y6N1 276 aa4.26□□□□□ -1.73
SKP1-212ENST00000523966 ZNF335Q9H4Z2 1342 aaPredicted RBP4.25□□□□□ -1.73
SKP1-212ENST00000523966 TCRBV7S3A2A0A539 114 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 SLC22A23A1A5C7 686 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 KCNJ18B7U540 433 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 PPP6CO00743 305 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 PRPF4O43172 522 aaKnown RBP eCLIP4.25□□□□□ -1.73
SKP1-212ENST00000523966 LCKP06239 509 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 TNFAIP3P21580 790 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 KLRC2P26717 231 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 HOXA7P31268 230 aaPredicted RBP4.25□□□□□ -1.73
SKP1-212ENST00000523966 CDH15P55291 814 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 RPS13P62277 151 aaKnown RBP4.25□□□□□ -1.73
SKP1-212ENST00000523966 NHLH1Q02575 133 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 GALNT2Q10471 571 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 SEC23BQ15437 767 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 BAK1Q16611 211 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 C5orf22Q49AR2 442 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 EARS2Q5JPH6 523 aaKnown RBP4.25□□□□□ -1.73
SKP1-212ENST00000523966 FAM171A1Q5VUB5 890 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 TTLL5Q6EMB2 1281 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 ACAD10Q6JQN1 1059 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 ZNF782Q6ZMW2 699 aaPredicted RBP4.25□□□□□ -1.73
SKP1-212ENST00000523966 FAM57BQ71RH2 274 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 ARMC8Q8IUR7 673 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 GALNT16Q8N428 558 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 ARL14EPQ8N8R7 260 aaPredicted RBP4.25□□□□□ -1.73
SKP1-212ENST00000523966 FAM98AQ8NCA5 519 aaKnown RBP4.25□□□□□ -1.73
SKP1-212ENST00000523966 DNAAF1Q8NEP3 725 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 C2CD4CQ8TF44 421 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 CNOT9Q92600 299 aaKnown RBP4.25□□□□□ -1.73
SKP1-212ENST00000523966 SKA1Q96BD8 255 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 KIF1BPQ96EK5 621 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 TXNRD2Q9NNW7 524 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 NRIP3Q9NQ35 241 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 TLR8Q9NR97 1041 aaKnown RBP4.25□□□□□ -1.73
SKP1-212ENST00000523966 SLC22A11Q9NSA0 550 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 TMEM248Q9NWD8 314 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 PPP1R14DQ9NXH3 145 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 OSGIN2Q9Y236 505 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 CYP46A1Q9Y6A2 500 aa4.25□□□□□ -1.73
SKP1-212ENST00000523966 GOLGA6L10A0A0M3HER8 536 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 OR6C68A6NDL8 312 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 CXorf65A6NEN9 183 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 F8W810 466 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 TNPO2O14787 897 aaKnown RBP4.24□□□□□ -1.73
SKP1-212ENST00000523966 UGDHO60701 494 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 IL1AP01583 271 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 FCGR2AP12318 317 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 MPGP29372 298 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 TYK2P29597 1187 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 GJC1P36383 396 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 CASP6P55212 293 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 TDGQ13569 410 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 ALG10Q5BKT4 473 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 ALG10BQ5I7T1 473 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 SH2D4BQ5SQS7 431 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 FAM69AQ5T7M9 428 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 MEX3CQ5U5Q3 659 aaKnown RBP4.24□□□□□ -1.73
SKP1-212ENST00000523966 ISM2Q6H9L7 571 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 RRM2BQ7LG56 351 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 CCDC25Q86WR0 208 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 RUFY2Q8WXA3 655 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 IP6K1Q92551 441 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 HSPH1Q92598 858 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 ZUFSPQ96AP4 578 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 EYA3Q99504 573 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 TUBB6Q9BUF5 446 aa4.24□□□□□ -1.73
SKP1-212ENST00000523966 SCNM1Q9BWG6 230 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms