RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 EDDM13A0A1B0GTR0 161 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 ILVBLA1L0T0 632 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 TMEM191CA6NGB0 347 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 FAM72CH0Y354 149 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 ATMINO43313 823 aaPredicted RBP16.82■□□□□ 0.28
PABPC1-221ENST00000522720 NDUFS2O75306 463 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 PLEKP08567 350 aaPredicted RBP16.82■□□□□ 0.28
PABPC1-221ENST00000522720 MYBL1P10243 752 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 HNRNPH3P31942 346 aaKnown RBP16.82■□□□□ 0.28
PABPC1-221ENST00000522720 SF3A2Q15428 464 aaKnown RBP16.82■□□□□ 0.28
PABPC1-221ENST00000522720 FAM72AQ5TYM5 149 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 FAM72DQ6L9T8 149 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 SCYL2Q6P3W7 929 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 ARMCX6Q7L4S7 300 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 TMC6Q7Z403 805 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 SLFN11Q7Z7L1 901 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 FAM72BQ86X60 149 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 CACUL1Q86Y37 369 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 DRC7Q8IY82 874 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 DEFB119Q8N690 84 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 FRS2Q8WU20 508 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 PIGKQ92643 395 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 PTPRN2Q92932 1015 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 TRIM11Q96F44 468 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 ZNF419Q96HQ0 510 aaPredicted RBP16.82■□□□□ 0.28
PABPC1-221ENST00000522720 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.82■□□□□ 0.28
PABPC1-221ENST00000522720 MAGEB5Q9BZ81 275 aa16.82■□□□□ 0.28
PABPC1-221ENST00000522720 WSB2Q9NYS7 404 aaPredicted RBP16.82■□□□□ 0.28
PABPC1-221ENST00000522720 CNOT8Q9UFF9 292 aaKnown RBP16.82■□□□□ 0.28
PABPC1-221ENST00000522720 A0A0D9SEW6 157 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 ATP9BO43861 1147 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 LRIG2O94898 1065 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 DESP17661 470 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 L1CAMP32004 1257 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 DPP6P42658 865 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 AIF1P55008 147 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 KRT83P78385 493 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 ZNF33AQ06730 810 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 EFHC2Q5JST6 749 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 LYSMD4Q5XG99 296 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 ZNF776Q68DI1 518 aaPredicted RBP16.81■□□□□ 0.28
PABPC1-221ENST00000522720 ZNF783Q6ZMS7 281 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 SYT12Q8IV01 421 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 SLC41A1Q8IVJ1 513 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 C12orf50Q8NA57 414 aaPredicted RBP16.81■□□□□ 0.28
PABPC1-221ENST00000522720 FNIP1Q8TF40 1166 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 ZNF653Q96CK0 615 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 FAM129BQ96TA1 746 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 PSMB7Q99436 277 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 C2orf49Q9BVC5 232 aaPredicted RBP16.81■□□□□ 0.28
PABPC1-221ENST00000522720 SMOC1Q9H4F8 434 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 SLC25A13Q9UJS0 675 aa16.81■□□□□ 0.28
PABPC1-221ENST00000522720 CHD5Q8TDI0 1954 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 A0A087X0T9 212 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 RNASEH1O60930 286 aaKnown RBP16.8■□□□□ 0.28
PABPC1-221ENST00000522720 DNTTP04053 509 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 FAM228BP0C875 321 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 RHOQP17081 205 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 SDHBP21912 280 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 ITPKAP23677 461 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 PSMA2P25787 234 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 HOXD12P35452 270 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 ID4P47928 161 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 TRIM14Q14142 442 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 RWDD4Q6NW29 188 aaKnown RBP16.8■□□□□ 0.28
PABPC1-221ENST00000522720 NLRP14Q86W24 1093 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 VSTM4Q8IW00 320 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 SH2D3CQ8N5H7 860 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 DCAF4L2Q8NA75 395 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 CADM4Q8NFZ8 388 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 OR7D4Q8NG98 312 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 OR8K1Q8NGG5 319 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 FOXJ1Q92949 421 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 RMDN1Q96DB5 314 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 TBC1D31Q96DN5 1066 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 GPR174Q9BXC1 333 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 TRIM7Q9C029 511 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 MRPL47Q9HD33 250 aaKnown RBP16.8■□□□□ 0.28
PABPC1-221ENST00000522720 TMEM74BQ9NUR3 256 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 ARHGAP20Q9P2F6 1191 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 VPS51Q9UID3 782 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 PILRBQ9UKJ0 227 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 FZD10Q9ULW2 581 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 SCML1Q9UN30 329 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 NEU3Q9UQ49 428 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 HS3ST2Q9Y278 367 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 SCINQ9Y6U3 715 aa16.8■□□□□ 0.28
PABPC1-221ENST00000522720 KHNYNO15037 678 aaKnown RBP16.79■□□□□ 0.28
PABPC1-221ENST00000522720 SNAP91O60641 907 aa16.79■□□□□ 0.28
PABPC1-221ENST00000522720 MT-CO1P00395 513 aa16.79■□□□□ 0.28
PABPC1-221ENST00000522720 VAV1P15498 845 aa16.79■□□□□ 0.28
PABPC1-221ENST00000522720 GNA12Q03113 381 aa16.79■□□□□ 0.28
PABPC1-221ENST00000522720 ZNF252P-AS1Q0IIN9 211 aa16.79■□□□□ 0.28
PABPC1-221ENST00000522720 ELAVL3Q14576 367 aaKnown RBP16.79■□□□□ 0.28
PABPC1-221ENST00000522720 DLG2Q15700 870 aa16.79■□□□□ 0.28
PABPC1-221ENST00000522720 CST6Q15828 149 aa16.79■□□□□ 0.28
PABPC1-221ENST00000522720 RSPO4Q2I0M5 234 aaPredicted RBP16.79■□□□□ 0.28
PABPC1-221ENST00000522720 TTC31Q49AM3 519 aaPredicted RBP16.79■□□□□ 0.28
PABPC1-221ENST00000522720 ACCSLQ4AC99 568 aa16.79■□□□□ 0.28
PABPC1-221ENST00000522720 PEAR1Q5VY43 1037 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms