RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 KCTD14Q9BQ13 255 aaPredicted RBP14.06□□□□□ -0.16
SYNPO-205ENST00000522122 ADGRE3Q9BY15 652 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 VTA1Q9NP79 307 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 RGS18Q9NS28 235 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 INPP4BO15327 924 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 SMNDC1O75940 238 aaKnown RBP eCLIP14.06□□□□□ -0.16
SYNPO-205ENST00000522122 LTFP02788 710 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 RPLP2P05387 115 aaKnown RBP14.06□□□□□ -0.16
SYNPO-205ENST00000522122 PTPRAP18433 802 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 MZF1P28698 734 aaPredicted RBP14.06□□□□□ -0.16
SYNPO-205ENST00000522122 AXLP30530 894 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 NOVP48745 357 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 ILF2Q12905 390 aaKnown RBP14.06□□□□□ -0.16
SYNPO-205ENST00000522122 HIST2H2ACQ16777 129 aaPredicted RBP14.06□□□□□ -0.16
SYNPO-205ENST00000522122 HIST2H2AA3Q6FI13 130 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 PRMT9Q6P2P2 845 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 LPCAT2Q7L5N7 544 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 TFAP2DQ7Z6R9 452 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 WRAP73Q9P2S5 460 aaPredicted RBP14.06□□□□□ -0.16
SYNPO-205ENST00000522122 PSMB4P28070 264 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 MAPK1P28482 360 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 CAPSQ13938 189 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 SAMD4BQ5PRF9 694 aaKnown RBP14.06□□□□□ -0.16
SYNPO-205ENST00000522122 FAM117BQ6P1L5 589 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 ALYREFQ86V81 257 aaKnown RBP14.06□□□□□ -0.16
SYNPO-205ENST00000522122 CPNE8Q86YQ8 564 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 FBXO39Q8N4B4 442 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 VPS33AQ96AX1 596 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 HSFY1Q96LI6 401 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 IL22Q9GZX6 179 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 MID1IP1Q9NPA3 183 aa14.06□□□□□ -0.16
SYNPO-205ENST00000522122 TCRBV9S1A1TA0A576 114 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 C4BPAP04003 597 aaKnown RBP14.05□□□□□ -0.16
SYNPO-205ENST00000522122 RHOCP08134 193 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 NFICP08651 508 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 PLK1P53350 603 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 WASHC5Q12768 1159 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 MSLNQ13421 630 aaPredicted RBP14.05□□□□□ -0.16
SYNPO-205ENST00000522122 FASTKD3Q14CZ7 662 aaKnown RBP14.05□□□□□ -0.16
SYNPO-205ENST00000522122 FAM183BPQ6ZVS7 135 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 RNF180Q86T96 592 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 TERB1Q8NA31 727 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 ACMSDQ8TDX5 336 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 SEPHS2Q99611 448 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 BDH2Q9BUT1 245 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 ULBP1Q9BZM6 244 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 DENND2DQ9H6A0 471 aaPredicted RBP14.05□□□□□ -0.16
SYNPO-205ENST00000522122 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.05□□□□□ -0.16
SYNPO-205ENST00000522122 ENDOD1O94919 500 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 CRADDP78560 199 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 SLC25A3Q00325 362 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 CCDC92Q53HC0 331 aaPredicted RBP14.05□□□□□ -0.16
SYNPO-205ENST00000522122 FNBP1LQ5T0N5 605 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 AAGABQ6PD74 315 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 CYP2R1Q6VVX0 501 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 RINLQ6ZS11 566 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 OR52K1Q8NGK4 314 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 CERS2Q96G23 380 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 ZFRQ96KR1 1074 aaKnown RBP14.05□□□□□ -0.16
SYNPO-205ENST00000522122 ABHD16BQ9H3Z7 469 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 DMAP1Q9NPF5 467 aaPredicted RBP14.05□□□□□ -0.16
SYNPO-205ENST00000522122 CDV3Q9UKY7 258 aaKnown RBP14.05□□□□□ -0.16
SYNPO-205ENST00000522122 H7C4K7 107 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 CLOCKO15516 846 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 MAFO75444 373 aaPredicted RBP14.05□□□□□ -0.16
SYNPO-205ENST00000522122 RECQL4O94761 1208 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 MMP8P22894 467 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 TNFSF9P41273 254 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 ABCG1P45844 678 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 NEPROQ6NW34 567 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 UNC5AQ6ZN44 842 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 SLC44A1Q8WWI5 657 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 FAM120BQ96EK7 910 aaKnown RBP14.05□□□□□ -0.16
SYNPO-205ENST00000522122 ACO2Q99798 780 aaKnown RBP14.05□□□□□ -0.16
SYNPO-205ENST00000522122 EBNA1BP2Q99848 306 aaKnown RBP14.05□□□□□ -0.16
SYNPO-205ENST00000522122 CDT1Q9H211 546 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 PIF1Q9H611 641 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 ENTPD7Q9NQZ7 604 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 FBXO6Q9NRD1 293 aaPredicted RBP14.05□□□□□ -0.16
SYNPO-205ENST00000522122 TAS2R13Q9NYV9 303 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 PNMA8BQ9ULN7 279 aaPredicted RBP14.05□□□□□ -0.16
SYNPO-205ENST00000522122 F8W810 466 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 PKNOX1P55347 436 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 MRPS22P82650 360 aaKnown RBP14.05□□□□□ -0.16
SYNPO-205ENST00000522122 PTF1AQ7RTS3 328 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 ANKS1BQ7Z6G8 1248 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 DHDDSQ86SQ9 333 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 ULK2Q8IYT8 1036 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 BSNDQ8WZ55 320 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 OPTNQ96CV9 577 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 TBL1YQ9BQ87 522 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 TKTL2Q9H0I9 626 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 ACTR8Q9H981 624 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 CDHR5Q9HBB8 845 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 TRPM5Q9NZQ8 1165 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 UMODL1Q5DID0 1318 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 LAMB1P07942 1786 aa14.05□□□□□ -0.16
SYNPO-205ENST00000522122 MYH13Q9UKX3 1938 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 CBX4O00257 560 aa14.04□□□□□ -0.16
SYNPO-205ENST00000522122 CELF2O95319 508 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms