RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 TBC1D3DA0A087WVF3 549 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 TBC1D3IA0A087WXS9 549 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 TBC1D3EA0A087X179 549 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 TBC1D3KA0A087X1G2 549 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 A0A1B0GVM2 712 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 TBC1D3FA6NER0 549 aaPredicted RBP20.88■□□□□ 0.93
PABPC1-217ENST00000521067 TCAF2A6NFQ2 919 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 TBC1D3LB9A6J9 549 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 LATO43561 262 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 RTN2O75298 545 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 FGFR1OPO95684 399 aaKnown RBP20.88■□□□□ 0.93
PABPC1-217ENST00000521067 ERBB2P04626 1255 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 TBC1D3HP0C7X1 549 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 ABCB4P21439 1286 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 PON1P27169 355 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 CLDN6P56747 220 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 SULT2A1Q06520 285 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 CYP4F3Q08477 520 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 CAMK4Q16566 473 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 COL28A1Q2UY09 1125 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 EFHC1Q5JVL4 640 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 OTUD1Q5VV17 481 aaPredicted RBP20.88■□□□□ 0.93
PABPC1-217ENST00000521067 TBC1D3GQ6DHY5 549 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 TBC1D3CQ6IPX1 549 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 OLFML1Q6UWY5 402 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 GBP6Q6ZN66 633 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 TBC1D3Q8IZP1 549 aaPredicted RBP20.88■□□□□ 0.93
PABPC1-217ENST00000521067 C1orf131Q8NDD1 294 aaKnown RBP20.88■□□□□ 0.93
PABPC1-217ENST00000521067 RNF34Q969K3 372 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 SPAG5Q96R06 1193 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 KIAA1468Q9P260 1216 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 FTSJ1Q9UET6 329 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 VANGL2Q9ULK5 521 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 HS3ST4Q9Y661 456 aa20.88■□□□□ 0.93
PABPC1-217ENST00000521067 I6L893 689 aaPredicted RBP20.87■□□□□ 0.93
PABPC1-217ENST00000521067 ATP9BO43861 1147 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 HSF2BPO75031 334 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 PNMA6AP0CW24 399 aaPredicted RBP20.87■□□□□ 0.93
PABPC1-217ENST00000521067 SLC2A3P11169 496 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 CLCN1P35523 988 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 NNMTP40261 264 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 VASPP50552 380 aaPredicted RBP20.87■□□□□ 0.93
PABPC1-217ENST00000521067 NXPH1P58417 271 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 BNIP3Q12983 259 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 DNAJC3Q13217 504 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 NME3Q13232 169 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 EXOC3L4Q17RC7 722 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 PTPN20Q4JDL3 420 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 RABGAP1LQ5R372 815 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 TTC39BQ5VTQ0 682 aaPredicted RBP20.87■□□□□ 0.93
PABPC1-217ENST00000521067 OR6B2Q6IFH4 312 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 DPY19L2P1Q6NXN4 242 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 C11orf57Q6ZUT1 292 aaPredicted RBP20.87■□□□□ 0.93
PABPC1-217ENST00000521067 SPATS2Q86XZ4 545 aaKnown RBP20.87■□□□□ 0.93
PABPC1-217ENST00000521067 GALNT15Q8N3T1 639 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 HNRNPLLQ8WVV9 542 aaKnown RBP20.87■□□□□ 0.93
PABPC1-217ENST00000521067 RPRD1AQ96P16 312 aaPredicted RBP20.87■□□□□ 0.93
PABPC1-217ENST00000521067 DKK4Q9UBT3 224 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 PPM1HQ9ULR3 514 aa20.87■□□□□ 0.93
PABPC1-217ENST00000521067 ADAMTS20P59510 1910 aa20.86■□□□□ 0.93
PABPC1-217ENST00000521067 TLR4O00206 839 aa20.86■□□□□ 0.93
PABPC1-217ENST00000521067 FOXN3O00409 490 aaPredicted RBP20.86■□□□□ 0.93
PABPC1-217ENST00000521067 PAGE1O75459 146 aa20.86■□□□□ 0.93
PABPC1-217ENST00000521067 ITGAVP06756 1048 aa20.86■□□□□ 0.93
PABPC1-217ENST00000521067 TFE3P19532 575 aaPredicted RBP20.86■□□□□ 0.93
PABPC1-217ENST00000521067 DLG2Q15700 870 aa20.86■□□□□ 0.93
PABPC1-217ENST00000521067 POM121L1PQ3SYA9 428 aa20.86■□□□□ 0.93
PABPC1-217ENST00000521067 SLC47A2Q86VL8 602 aa20.86■□□□□ 0.93
PABPC1-217ENST00000521067 SKA1Q96BD8 255 aa20.86■□□□□ 0.93
PABPC1-217ENST00000521067 FAM81BQ96LP2 452 aa20.86■□□□□ 0.93
PABPC1-217ENST00000521067 PLCB1Q9NQ66 1216 aa20.86■□□□□ 0.93
PABPC1-217ENST00000521067 GDF3Q9NR23 364 aa20.86■□□□□ 0.93
PABPC1-217ENST00000521067 SNX10Q9Y5X0 201 aa20.86■□□□□ 0.93
PABPC1-217ENST00000521067 ENC1O14682 589 aa20.85■□□□□ 0.93
PABPC1-217ENST00000521067 CNTN5O94779 1100 aa20.85■□□□□ 0.93
PABPC1-217ENST00000521067 MT-CO1P00395 513 aa20.85■□□□□ 0.93
PABPC1-217ENST00000521067 MAT2AP31153 395 aaKnown RBP20.85■□□□□ 0.93
PABPC1-217ENST00000521067 SLC6A3Q01959 620 aa20.85■□□□□ 0.93
PABPC1-217ENST00000521067 CNTN1Q12860 1018 aa20.85■□□□□ 0.93
PABPC1-217ENST00000521067 C5orf22Q49AR2 442 aa20.85■□□□□ 0.93
PABPC1-217ENST00000521067 ACCSLQ4AC99 568 aa20.85■□□□□ 0.93
PABPC1-217ENST00000521067 ARTNQ5T4W7 220 aa20.85■□□□□ 0.93
PABPC1-217ENST00000521067 AGBL4Q5VU57 503 aa20.85■□□□□ 0.93
PABPC1-217ENST00000521067 EID2Q8N6I1 236 aa20.85■□□□□ 0.93
PABPC1-217ENST00000521067 CNDP2Q96KP4 475 aaKnown RBP20.85■□□□□ 0.93
PABPC1-217ENST00000521067 TBC1D30Q9Y2I9 924 aa20.85■□□□□ 0.93
PABPC1-217ENST00000521067 ARID1BQ8NFD5 2236 aaPredicted RBP20.85■□□□□ 0.93
PABPC1-217ENST00000521067 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.84■□□□□ 0.93
PABPC1-217ENST00000521067 GTPBP10A4D1E9 387 aaKnown RBP20.84■□□□□ 0.93
PABPC1-217ENST00000521067 M0QYT0 321 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 RNF103O00237 685 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 PLRG1O43660 514 aaKnown RBP20.84■□□□□ 0.93
PABPC1-217ENST00000521067 DAB1O75553 588 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 ADCY5O95622 1261 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 LDOC1O95751 146 aaPredicted RBP20.84■□□□□ 0.93
PABPC1-217ENST00000521067 EPHA8P29322 1005 aaPredicted RBP20.84■□□□□ 0.93
PABPC1-217ENST00000521067 NOS2P35228 1153 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 RXRGP48443 463 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 OXCT1P55809 520 aa20.84■□□□□ 0.93
PABPC1-217ENST00000521067 TAS2R38P59533 333 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms