RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 CCDC110Q8TBZ0 833 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 TFB1MQ8WVM0 346 aaKnown RBP15.42■□□□□ 0.06
SREK1-209ENST00000520953 RSAD2Q8WXG1 361 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 GAS2L1Q99501 681 aaPredicted RBP15.42■□□□□ 0.06
SREK1-209ENST00000520953 ERP44Q9BS26 406 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 BCLAF3A2AJT9 711 aaKnown RBP15.42■□□□□ 0.06
SREK1-209ENST00000520953 RASA4BC9J798 803 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 RASA4O43374 803 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 RNF40O75150 1001 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 LATS1O95835 1130 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 GLDCP23378 1020 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 IVDP26440 423 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 SERPINB6P35237 376 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 PTK6Q13882 451 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 RABGAP1LQ5R372 815 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 SYCP2LQ5T4T6 812 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 DUPD1Q68J44 220 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 UMODL1-AS1Q8N2C9 162 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 CARNMT1Q8N4J0 409 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 SMRP1Q8NCR6 262 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 DDI1Q8WTU0 396 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 SMARCD2Q92925 531 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 TMA16Q96EY4 203 aaKnown RBP15.42■□□□□ 0.06
SREK1-209ENST00000520953 GUCD1Q96NT3 240 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 FRMD8P1Q9BZ68 369 aaPredicted RBP15.42■□□□□ 0.06
SREK1-209ENST00000520953 PLA2G2FQ9BZM2 168 aa15.42■□□□□ 0.06
SREK1-209ENST00000520953 J3KR12 359 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 TP73O15350 636 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 HOXD9P28356 352 aaPredicted RBP15.41■□□□□ 0.06
SREK1-209ENST00000520953 ECHS1P30084 290 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 RPL22P35268 128 aaKnown RBP15.41■□□□□ 0.06
SREK1-209ENST00000520953 CDH4P55283 916 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 WASHC5Q12768 1159 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 ZBTB17Q13105 803 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 XRCC4Q13426 336 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 PDK1Q15118 436 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 FAXCQ5TGI0 409 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 USP33Q8TEY7 942 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 RPP25Q9BUL9 199 aaKnown RBP15.41■□□□□ 0.06
SREK1-209ENST00000520953 ASIC3Q9UHC3 531 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 CDH7Q9ULB5 785 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 DENND4AQ7Z401 1863 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 MYO18AQ92614 2054 aaKnown RBP15.41■□□□□ 0.06
SREK1-209ENST00000520953 FAM187AA6NFU0 413 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 SOBPA7XYQ1 873 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 HEPACAM2A8MVW5 462 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 MAFKO60675 156 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 GBP2P32456 591 aaPredicted RBP15.41■□□□□ 0.06
SREK1-209ENST00000520953 PPIDQ08752 370 aaKnown RBP15.41■□□□□ 0.06
SREK1-209ENST00000520953 MTA1Q13330 715 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 FYB2Q5VWT5 728 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 CDKL3Q8IVW4 592 aaPredicted RBP15.41■□□□□ 0.06
SREK1-209ENST00000520953 CELF5Q8N6W0 485 aaKnown RBP15.41■□□□□ 0.06
SREK1-209ENST00000520953 HTR3CQ8WXA8 447 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 EXOC4Q96A65 974 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 PRDM16Q9HAZ2 1276 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 GRHL1Q9NZI5 618 aa15.41■□□□□ 0.06
SREK1-209ENST00000520953 USP15Q9Y4E8 981 aaPredicted RBP15.41■□□□□ 0.06
SREK1-209ENST00000520953 CHD5Q8TDI0 1954 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 TRIOO75962 3097 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 A0A1B0GVM2 712 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 GRXCR2A6NFK2 248 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 TCAF2A6NFQ2 919 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 OTOL1A6NHN0 477 aaPredicted RBP15.4■□□□□ 0.06
SREK1-209ENST00000520953 TRIM24O15164 1050 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 RAMP2O60895 175 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 GAS8O95995 478 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 KCNA5P22460 613 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 MZF1P28698 734 aaPredicted RBP15.4■□□□□ 0.06
SREK1-209ENST00000520953 GPS1Q13098 491 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 LY6G5CQ5SRR4 150 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 PARM1Q6UWI2 310 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 CPXM2Q8N436 756 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 ATPAF2Q8N5M1 289 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.4■□□□□ 0.06
SREK1-209ENST00000520953 CCDC89Q8N998 374 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 HJURPQ8NCD3 748 aaPredicted RBP15.4■□□□□ 0.06
SREK1-209ENST00000520953 GRK7Q8WTQ7 553 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 FGF14Q92915 247 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 HDAC11Q96DB2 347 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 KXD1Q9BQD3 176 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 GDE1Q9NZC3 331 aa15.4■□□□□ 0.06
SREK1-209ENST00000520953 RNF103O00237 685 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 PPP1R12AO14974 1030 aaPredicted RBP15.39■□□□□ 0.05
SREK1-209ENST00000520953 CLDN11O75508 207 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 ARSAP15289 507 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 TNK2Q07912 1038 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 GRM2Q14416 872 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 POLD3Q15054 466 aaPredicted RBP15.39■□□□□ 0.05
SREK1-209ENST00000520953 P3H1Q32P28 736 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 HEATR6Q6AI08 1181 aaKnown RBP15.39■□□□□ 0.05
SREK1-209ENST00000520953 ASTLQ6HA08 431 aaPredicted RBP15.39■□□□□ 0.05
SREK1-209ENST00000520953 VITQ6UXI7 678 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 ZNF354CQ86Y25 554 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 ADGRG2Q8IZP9 1017 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 LZTR1Q8N653 840 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 EIF1ADQ8N9N8 165 aaKnown RBP15.39■□□□□ 0.05
SREK1-209ENST00000520953 SEC14L1Q92503 715 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 PWWP2AQ96N64 755 aa15.39■□□□□ 0.05
SREK1-209ENST00000520953 DDX50Q9BQ39 737 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms