RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 KRT77Q7Z794 578 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 ANKRD13BQ86YJ7 626 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 FAM9BQ8IZU0 186 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 TCP11L2Q8N4U5 519 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 SPATA3Q8NHX4 192 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 ST8SIA4Q92187 359 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 EDC3Q96F86 508 aaKnown RBP4.48□□□□□ -1.69
SQLE-204ENST00000520493 ADGRE3Q9BY15 652 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 AGXT2Q9BYV1 514 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 PLEKHA5Q9HAU0 1116 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 ARL8BQ9NVJ2 186 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 KCND3Q9UK17 655 aa4.48□□□□□ -1.69
SQLE-204ENST00000520493 C3orf70A6NLC5 250 aaPredicted RBP4.47□□□□□ -1.69
SQLE-204ENST00000520493 FYB1O15117 783 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 CD63P08962 238 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 DRD1P21728 446 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 YY1P25490 414 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 PNPLA4P41247 253 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 JAK3P52333 1124 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 RPL15P61313 204 aaKnown RBP4.47□□□□□ -1.69
SQLE-204ENST00000520493 GPC5P78333 572 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 DEUP1Q05D60 604 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 SLC14A1Q13336 389 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 TWIST1Q15672 202 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 CCDC96Q2M329 555 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 FAM133BQ5BKY9 247 aaKnown RBP4.47□□□□□ -1.69
SQLE-204ENST00000520493 LIPMQ5VYY2 423 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 ACAD10Q6JQN1 1059 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 DEF8Q6ZN54 512 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 HEATR4Q86WZ0 1026 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 OR52L2PQ8NGH6 319 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 ADAMTS15Q8TE58 950 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 NPIPB3Q92617 1050 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 SH3KBP1Q96B97 665 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 PPP1R10Q96QC0 940 aaKnown RBP4.47□□□□□ -1.69
SQLE-204ENST00000520493 MECRQ9BV79 373 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 PAIP1Q9H074 479 aaKnown RBP4.47□□□□□ -1.69
SQLE-204ENST00000520493 OLA1Q9NTK5 396 aaKnown RBP4.47□□□□□ -1.69
SQLE-204ENST00000520493 IRAK4Q9NWZ3 460 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 FZD4Q9ULV1 537 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 CYP46A1Q9Y6A2 500 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 TDRD9Q8NDG6 1382 aaKnown RBP4.47□□□□□ -1.69
SQLE-204ENST00000520493 ZMYM2Q9UBW7 1377 aa4.47□□□□□ -1.69
SQLE-204ENST00000520493 CACNA1IQ9P0X4 2223 aa4.46□□□□□ -1.69
SQLE-204ENST00000520493 CYP3A7-CYP3A51PA0A087WV96 503 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 INPPL1O15357 1258 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 TMCC2O75069 709 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 SLC3A2P08195 630 aaKnown RBP4.46□□□□□ -1.7
SQLE-204ENST00000520493 TMIGD3P0DMS9 266 aaPredicted RBP4.46□□□□□ -1.7
SQLE-204ENST00000520493 ATP1A3P13637 1013 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 ATF7P17544 494 aaPredicted RBP4.46□□□□□ -1.7
SQLE-204ENST00000520493 CYP3A7P24462 503 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 DUSP1P28562 367 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 THBS4P35443 961 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 COPB2P35606 906 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 CASP6P55212 293 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 DCAF7P61962 342 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 FHL1Q13642 323 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 GPATCH4Q5T3I0 446 aaKnown RBP4.46□□□□□ -1.7
SQLE-204ENST00000520493 ITPRIPL1Q6GPH6 555 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 GRHL2Q6ISB3 625 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 KRTAP5-4Q6L8H1 288 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 PDXDC1Q6P996 788 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 OR8H2Q8N162 312 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 ANKRD44Q8N8A2 993 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 NRACQ8N912 160 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 ZMIZ2Q8NF64 920 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 ZCCHC10Q8TBK6 192 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 NSMCE1Q8WV22 266 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 RRP36Q96EU6 259 aaKnown RBP4.46□□□□□ -1.7
SQLE-204ENST00000520493 RSRC1Q96IZ7 334 aaKnown RBP4.46□□□□□ -1.7
SQLE-204ENST00000520493 FUZQ9BT04 418 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 RNF26Q9BY78 433 aaPredicted RBP4.46□□□□□ -1.7
SQLE-204ENST00000520493 NUAK2Q9H093 628 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 POT1Q9NUX5 634 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 PPP1R14DQ9NXH3 145 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 NSMCE4AQ9NXX6 385 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 SUFUQ9UMX1 484 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 GDAQ9Y2T3 454 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 PCDHB7Q9Y5E2 793 aa4.46□□□□□ -1.7
SQLE-204ENST00000520493 TBC1D3DA0A087WVF3 549 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 TBC1D3IA0A087WXS9 549 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 TBC1D3EA0A087X179 549 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 TBC1D3KA0A087X1G2 549 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 CCDC187A0A096LP49 1063 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 TBC1D3BA6NDS4 549 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 TBC1D3FA6NER0 549 aaPredicted RBP4.45□□□□□ -1.7
SQLE-204ENST00000520493 TBC1D3LB9A6J9 549 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 STX16-NPEPL1H3BU86 382 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 STX16O14662 325 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 INSIG1O15503 277 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 KCNAB3O43448 404 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 CA12O43570 354 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 TULP3O75386 442 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 HEXIM1O94992 359 aaKnown RBP4.45□□□□□ -1.7
SQLE-204ENST00000520493 CYP21A2P08686 494 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 TBC1D3HP0C7X1 549 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 SNHG28P0DPA3 235 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 PRF1P14222 555 aa4.45□□□□□ -1.7
SQLE-204ENST00000520493 CHN1P15882 459 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms