RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ARL15Q9NXU5 204 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 TUBA8Q9NY65 449 aaPredicted RBP4.05□□□□□ -1.76
VPS13B-207ENST00000518569 RRN3Q9NYV6 651 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 SUFUQ9UMX1 484 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 GTF2A1LQ9UNN4 478 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 GDAQ9Y2T3 454 aa4.05□□□□□ -1.76
VPS13B-207ENST00000518569 NPHP1O15259 732 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 MSI1O43347 362 aaKnown RBP4.04□□□□□ -1.76
VPS13B-207ENST00000518569 DHX16O60231 1041 aaKnown RBP4.04□□□□□ -1.76
VPS13B-207ENST00000518569 UGDHO60701 494 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 NEURL1O76050 574 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 FGBP02675 491 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 AVPR2P30518 371 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 CHRNA5P30532 468 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 MMP13P45452 471 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 ABCG1P45844 678 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 MAPK9P45984 424 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 VAMP2P63027 116 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 GOLGA8FQ08AF8 430 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 TBL3Q12788 808 aaKnown RBP4.04□□□□□ -1.76
VPS13B-207ENST00000518569 GALNT3Q14435 633 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 DLGAP5Q15398 846 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 MIDNQ504T8 468 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 CERS3Q8IU89 383 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 MPLKIPQ8TAP9 179 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 NCSTNQ92542 709 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 RPL36ALQ969Q0 106 aaKnown RBP4.04□□□□□ -1.76
VPS13B-207ENST00000518569 ZFYVE19Q96K21 471 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 FRG2BQ96QU4 278 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 TRMOQ9BU70 441 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 SCNM1Q9BWG6 230 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 CADM1Q9BY67 442 aaKnown RBP4.04□□□□□ -1.76
VPS13B-207ENST00000518569 Q9N2J8 555 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 TMEM184CQ9NVA4 438 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 TMEM160Q9NX00 188 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 PDP2Q9P2J9 529 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 LAMP3Q9UQV4 416 aa4.04□□□□□ -1.76
VPS13B-207ENST00000518569 COL3A1P02461 1466 aaPredicted RBP4.04□□□□□ -1.76
VPS13B-207ENST00000518569 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.03□□□□□ -1.76
VPS13B-207ENST00000518569 DNAJC9-AS1A6NH13 148 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 FOXO6A8MYZ6 492 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 RHODO00212 210 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 LYL1P12980 280 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 GJC1P36383 396 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 CCR5P51681 352 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 ARHGAP8P85298 464 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 ZBTB16Q05516 673 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.03□□□□□ -1.76
VPS13B-207ENST00000518569 Q4G0T1 1027 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 WDR45BQ5MNZ6 344 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 PXDC1Q5TGL8 231 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 NAA35Q5VZE5 725 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 ZNF793Q6ZN11 406 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 IGFN1Q86VF2 1251 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 BRSK2Q8IWQ3 736 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 DDIASQ8IXT1 998 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 VPS52Q8N1B4 723 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 DENND1AQ8TEH3 1009 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 C2CD4CQ8TF44 421 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 IP6K1Q92551 441 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 KAT2AQ92830 837 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 MAELQ96JY0 434 aaKnown RBP4.03□□□□□ -1.76
VPS13B-207ENST00000518569 WDR83Q9BRX9 315 aaKnown RBP4.03□□□□□ -1.76
VPS13B-207ENST00000518569 C1QTNF7Q9BXJ2 289 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.03□□□□□ -1.76
VPS13B-207ENST00000518569 BCCIPQ9P287 314 aaKnown RBP eCLIP4.03□□□□□ -1.76
VPS13B-207ENST00000518569 ZNF70Q9UC06 446 aaPredicted RBP4.03□□□□□ -1.76
VPS13B-207ENST00000518569 SLC13A4Q9UKG4 626 aa4.03□□□□□ -1.76
VPS13B-207ENST00000518569 CCDC196A0A1B0GTZ2 297 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 WDR91A4D1P6 747 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 CXorf65A6NEN9 183 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 RRN3P2A6NIE6 340 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 ADAM10O14672 748 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 SYN3O14994 580 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 HOXC11O43248 304 aaPredicted RBP4.02□□□□□ -1.77
VPS13B-207ENST00000518569 ANP32CO43423 234 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 TOP3BO95985 862 aaKnown RBP4.02□□□□□ -1.77
VPS13B-207ENST00000518569 CDK4P11802 303 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 CPA1P15085 419 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 TYK2P29597 1187 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 CIITAP33076 1130 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 TRPC3Q13507 836 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 BYSLQ13895 437 aaKnown RBP4.02□□□□□ -1.77
VPS13B-207ENST00000518569 TWIST1Q15672 202 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 C5orf22Q49AR2 442 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 ARL13AQ5H913 290 aaPredicted RBP4.02□□□□□ -1.77
VPS13B-207ENST00000518569 PIK3CD-AS1Q5SR53 167 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 FAM171A1Q5VUB5 890 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 C11orf87Q6NUJ2 197 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 AAGABQ6PD74 315 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 GJB7Q6PEY0 223 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 MRPL10Q7Z7H8 261 aaKnown RBP4.02□□□□□ -1.77
VPS13B-207ENST00000518569 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.02□□□□□ -1.77
VPS13B-207ENST00000518569 PIP4P1Q86T03 277 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 IL17REQ8NFR9 667 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 HDAC7Q8WUI4 952 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 RNFT2Q96EX2 444 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 NPLQ9BXD5 320 aaPredicted RBP4.02□□□□□ -1.77
VPS13B-207ENST00000518569 FRMD8Q9BZ67 464 aaPredicted RBP4.02□□□□□ -1.77
VPS13B-207ENST00000518569 TAOK3Q9H2K8 898 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms