RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 MTMR8Q96EF0 704 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 PERPQ96FX8 193 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 ZNF274Q96GC6 653 aaPredicted RBP3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 KCNK17Q96T54 332 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 SPZ1Q9BXG8 430 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 GLT8D2Q9H1C3 349 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 PDCL3Q9H2J4 239 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 LRRN3Q9H3W5 708 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 NXF3Q9H4D5 531 aaKnown RBP3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 ESRP2Q9H6T0 727 aaKnown RBP3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 RIOX1Q9H6W3 641 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 PLEKHF2Q9H8W4 249 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 IFT122Q9HBG6 1241 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 TRPC7Q9HCX4 862 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 ZNF302Q9NR11 478 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 KLHL11Q9NVR0 708 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 RBM28Q9NW13 759 aaKnown RBP3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 TMEM160Q9NX00 188 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 OCIAD1Q9NX40 245 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 C5AR2Q9P296 337 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 MAD2L2Q9UI95 211 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 LUC7L2Q9Y383 392 aaKnown RBP3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 SLC12A7Q9Y666 1083 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 RPS6KL1Q9Y6S9 549 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 RNF215Q9Y6U7 377 aa3.34□□□□□ -1.87
SCARNA13-201ENST00000516672 ARID1AO14497 2285 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 MYH9P35579 1960 aaKnown RBP3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 HCFC1P51610 2035 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 PNMA6FA0A0J9YX94 578 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 A6NNC1 897 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 ZBTB5O15062 677 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 ZBTB43O43298 467 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 ZNF500O60304 480 aaPredicted RBP3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 UNC5CO95185 931 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 NFICP08651 508 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 CCNFP41002 786 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 ZNF132P52740 706 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 THOP1P52888 689 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 GALCP54803 685 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 NR1H2P55055 460 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 ZNF445P59923 1031 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 PDE4CQ08493 712 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 TNK1Q13470 666 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 MTMR1Q13613 665 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 TAF12Q16514 161 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 ADCK5Q3MIX3 580 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 FILIP1LQ4L180 1135 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 ZNF542PQ5EBM4 170 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 DCAF12Q5T6F0 453 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 KRT79Q5XKE5 535 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 BTBD8Q5XKL5 378 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 RUSC1-AS1Q66K80 236 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 ANKS6Q68DC2 871 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 GRAMD4Q6IC98 578 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 CENPPQ6IPU0 288 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 APOA5Q6Q788 366 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 FAM180AQ6UWF9 173 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 IL17RELQ6ZVW7 336 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 IQCHQ86VS3 1027 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 ZSCAN30Q86W11 494 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 HACE1Q8IYU2 909 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 ZNF654Q8IZM8 581 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 ARIH2OSQ8N7S6 290 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 C3orf20Q8ND61 904 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 RCBTB1Q8NDN9 531 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 C3orf58Q8NDZ4 430 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 THAP4Q8WY91 577 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 LARP4BQ92615 738 aaKnown RBP3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 MRPS31Q92665 395 aaKnown RBP3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 GLMNQ92990 594 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 REPS1Q96D71 796 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 JAKMIP1Q96N16 626 aaKnown RBP3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 AGAP3Q96P47 875 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 ZKSCAN3Q9BRR0 538 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 TRIM7Q9C029 511 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 ZCCHC2Q9C0B9 1178 aaKnown RBP3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 TRIT1Q9H3H1 467 aaKnown RBP3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 TMEM206Q9H813 350 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 MINDY3Q9H8M7 445 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 JMJD4Q9H9V9 463 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 RPF1Q9H9Y2 349 aaKnown RBP3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 VAT1LQ9HCJ6 419 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 ANLNQ9NQW6 1124 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 SLC39A1Q9NY26 324 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 PADI4Q9UM07 663 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 MAGED2Q9UNF1 606 aaPredicted RBP3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 MEMO1Q9Y316 297 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 L3MBTL1Q9Y468 752 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 TAF6LQ9Y6J9 622 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 PTPRJQ12913 1337 aa3.33□□□□□ -1.88
SCARNA13-201ENST00000516672 TRPM6Q9BX84 2022 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 KMT2AQ03164 3969 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 FAM90A27PA6NNH2 459 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 TTLL13PA6NNM8 815 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 C10orf142B7Z368 130 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 PIK3CDO00329 1044 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 TACC1O75410 805 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 CDKL5O76039 1030 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 TOXO94900 526 aa3.32□□□□□ -1.88
SCARNA13-201ENST00000516672 CCNE2O96020 404 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms