RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 CD19P15391 556 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CPEP16870 476 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PTPN1P18031 435 aaKnown RBP2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ATF6P18850 670 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CD58P19256 250 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MMP8P22894 467 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 IGFBP6P24592 240 aaPredicted RBP2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GRK2P25098 689 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 LMO2P25791 158 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DDX6P26196 483 aaKnown RBP eCLIP2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KLRC2P26717 231 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CASP14P31944 242 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ELF1P32519 619 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 OR1D2P34982 312 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KRT9P35527 623 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GRK3P35626 688 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GNL1P36915 607 aaPredicted RBP2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GPD2P43304 727 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ACADSBP45954 432 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RAP1GAPP47736 663 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GABRB2P47870 512 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ALDH1A3P47895 512 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PPP3CCP48454 512 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KLK7P49862 253 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TUBP50607 506 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 IRAK1P51617 712 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SLC5A3P53794 718 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CDH8P55286 799 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SLC8A3P57103 927 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SNX16P57768 344 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 POLR2FP61218 127 aaKnown RBP2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PSMC1P62191 440 aaKnown RBP2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NOMO3P69849 1222 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RBM10P98175 930 aaKnown RBP2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FMO1Q01740 532 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CDR2Q01850 454 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 APBA1Q02410 837 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MVKQ03426 396 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ITIH3Q06033 890 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KLHL30Q0D2K2 578 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 LRMPQ12912 555 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PDCLQ13371 301 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZNF460Q14592 562 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 VEPH1Q14D04 833 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ASIC2Q16515 512 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ASTE1Q2TB18 679 aaPredicted RBP2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SLC39A12Q504Y0 691 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TDRD12Q587J7 1177 aaKnown RBP2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RAB41Q5JT25 222 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 C10orf76Q5T2E6 689 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MROH9Q5TGP6 573 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SFMBT2Q5VUG0 894 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SNX30Q5VWJ9 437 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MBLAC2Q68D91 279 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PM20D1Q6GTS8 502 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GJB7Q6PEY0 223 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PRSS55Q6UWB4 352 aaPredicted RBP2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ARHGAP36Q6ZRI8 547 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CLEC20AQ6ZU45 233 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PAQR9Q6ZVX9 377 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RRAGAQ7L523 313 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SLC26A9Q7LBE3 791 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TAS1R1Q7RTX1 841 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CCDC186Q7Z3E2 898 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TMC6Q7Z403 805 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 IRF2BP2Q7Z5L9 587 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ADGRD2Q7Z7M1 963 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TMEM110Q86TL2 294 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SLCO6A1Q86UG4 719 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ITIH5Q86UX2 942 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 VPS36Q86VN1 386 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TTC30AQ86WT1 665 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CEP57Q86XR8 500 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PHF13Q86YI8 300 aaPredicted RBP2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TMC8Q8IU68 726 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZDHHC17Q8IUH5 632 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CREBRFQ8IUR6 639 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SPATA2LQ8IUW3 424 aaPredicted RBP2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RBM12BQ8IXT5 1001 aaKnown RBP2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CCDC170Q8IYT3 715 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FUKQ8N0W3 1084 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZNF276Q8N554 614 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TC2NQ8N9U0 490 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SMRP1Q8NCR6 262 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TMEM35BQ8NCS4 154 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MSANTD4Q8NCY6 345 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 C1orf131Q8NDD1 294 aaKnown RBP2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CCDC112Q8NEF3 446 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZMIZ2Q8NF64 920 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 OR8K1Q8NGG5 319 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PCDH19Q8TAB3 1148 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 OLIG1Q8TAK6 271 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 IPO4Q8TEX9 1081 aaKnown RBP2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SLC22A17Q8WUG5 538 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CHAC2Q8WUX2 184 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SLC35F5Q8WV83 523 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZNF606Q8WXB4 792 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 IRGQQ8WZA9 623 aa2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ANP32BQ92688 251 aaKnown RBP2.3□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RABGGTAQ92696 567 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms