RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 ZNF423Q2M1K9 1284 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 KIF19Q2TAC6 998 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 C5orf22Q49AR2 442 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 C2CD6Q53TS8 623 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 C6orf118Q5T5N4 469 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-215ENST00000515516 TRIM72Q6ZMU5 477 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 CCDC114Q96M63 670 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 CAMK1GQ96NX5 476 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 HAPLN3Q96S86 360 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 C2orf49Q9BVC5 232 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-215ENST00000515516 ACE2Q9BYF1 805 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-215ENST00000515516 IL21RQ9HBE5 538 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 SERGEFQ9UGK8 458 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 ADAMTS1Q9UHI8 967 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 ANKRD6Q9Y2G4 727 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 TBC1D30Q9Y2I9 924 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 PCDHGB2Q9Y5G2 931 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 SNX11Q9Y5W9 270 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 TBC1D3DA0A087WVF3 549 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 TBC1D3IA0A087WXS9 549 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 TBC1D3EA0A087X179 549 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 TBC1D3KA0A087X1G2 549 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 A0A1W2PPC4 97 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 TBC1D3FA6NER0 549 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-215ENST00000515516 DRGXA6NNA5 263 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 TBC1D3LB9A6J9 549 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 ATP9BO43861 1147 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 BNIP3LO60238 219 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 SRGAP2O75044 1071 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 CNTN5O94779 1100 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 IGHV4-34P06331 123 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 TBC1D3HP0C7X1 549 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 VAV1P15498 845 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 SPINK2P20155 84 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 OR1E1P30953 314 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 FLT3P36888 993 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 IRAK1P51617 712 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 CCR5P51681 352 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 UBXN1Q04323 297 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 ARL13BQ3SXY8 428 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 SLC45A4Q5BKX6 768 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 CCDC183Q5T5S1 534 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 OTUD1Q5VV17 481 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-215ENST00000515516 TBC1D3GQ6DHY5 549 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 TBC1D3CQ6IPX1 549 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 ARCQ7LC44 396 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 SETD3Q86TU7 594 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-215ENST00000515516 TBC1D3Q8IZP1 549 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-215ENST00000515516 ATP11CQ8NB49 1132 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 FRS2Q8WU20 508 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 SLC20A1Q8WUM9 679 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 ALG14Q96F25 216 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 CFAP57Q96MR6 1250 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 SCNM1Q9BWG6 230 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 ADAM33Q9BZ11 813 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 NAT10Q9H0A0 1025 aaKnown RBP14.03□□□□□ -0.16
TCOF1-215ENST00000515516 AASDHPPTQ9NRN7 309 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 METTL5Q9NRN9 209 aaKnown RBP14.03□□□□□ -0.16
TCOF1-215ENST00000515516 LIMA1Q9UHB6 759 aaKnown RBP14.03□□□□□ -0.16
TCOF1-215ENST00000515516 TMEM59LQ9UK28 342 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 APOBEC2Q9Y235 224 aaKnown RBP14.03□□□□□ -0.16
TCOF1-215ENST00000515516 FNDC3AQ9Y2H6 1198 aaKnown RBP14.03□□□□□ -0.16
TCOF1-215ENST00000515516 SNX10Q9Y5X0 201 aa14.03□□□□□ -0.16
TCOF1-215ENST00000515516 LGALS16A8MUM7 142 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 E9PAM4 449 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 ALOX15BO15296 676 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 FLRT2O43155 660 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 SLC7A4O43246 635 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 HYAL3O43820 417 aaPredicted RBP14.02□□□□□ -0.17
TCOF1-215ENST00000515516 DFNA5O60443 496 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 CYP1A1P04798 512 aaPredicted RBP14.02□□□□□ -0.17
TCOF1-215ENST00000515516 PROS1P07225 676 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 SDC4P31431 198 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 NSFP46459 744 aaKnown RBP14.02□□□□□ -0.17
TCOF1-215ENST00000515516 ADPRHP54922 357 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 JAM2P57087 298 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 FAM193AP78312 1265 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 ATP11AP98196 1134 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 BNC1Q01954 994 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 CCDC15Q0P6D6 951 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 ALFQ53S48 1182 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 TFAP2DQ7Z6R9 452 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 PRPF39Q86UA1 669 aaKnown RBP14.02□□□□□ -0.17
TCOF1-215ENST00000515516 FAM131BQ86XD5 332 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 SH2D3CQ8N5H7 860 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 AADATQ8N5Z0 425 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 OR52K2Q8NGK3 314 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 RHBDD1Q8TEB9 315 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 CDC6Q99741 560 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 SPON2Q9BUD6 331 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 SEPT11Q9NVA2 429 aaKnown RBP14.02□□□□□ -0.17
TCOF1-215ENST00000515516 MPP6Q9NZW5 540 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 NOCTQ9UK39 431 aaKnown RBP14.02□□□□□ -0.17
TCOF1-215ENST00000515516 PCOLCE2Q9UKZ9 415 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 SIK3Q9Y2K2 1263 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 NEUROG3Q9Y4Z2 214 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 OR51B4Q9Y5P0 310 aa14.02□□□□□ -0.17
TCOF1-215ENST00000515516 TNRC6BQ9UPQ9 1833 aaKnown RBP14.01□□□□□ -0.17
TCOF1-215ENST00000515516 CNOT1A5YKK6 2376 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms