RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 POLR2EP19388 210 aaKnown RBP8.56□□□□□ -1.04
CCL28-204ENST00000514421 HLA-FP30511 346 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 NTSR1P30989 418 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 MAN1A1P33908 653 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 SLC1A1P43005 524 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 SGSHP51688 502 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 DGKEP52429 567 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 OXCT1P55809 520 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 HDAC4P56524 1084 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 C2orf54Q08AI8 447 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 ZNF177Q13360 481 aaPredicted RBP8.56□□□□□ -1.04
CCL28-204ENST00000514421 EIF4HQ15056 248 aaKnown RBP8.56□□□□□ -1.04
CCL28-204ENST00000514421 CRY1Q16526 586 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 CDO1Q16878 200 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 LONRF2Q1L5Z9 754 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 DCAF12L1Q5VU92 463 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 CCDC70Q6NSX1 233 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 SCYL2Q6P3W7 929 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 TSSK4Q6SA08 328 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 CHST9Q7L1S5 443 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 ADIPOR2Q86V24 386 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 CHPFQ8IZ52 775 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 AHI1Q8N157 1196 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 ALLCQ8N6M5 410 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.56□□□□□ -1.04
CCL28-204ENST00000514421 ZNF513Q8N8E2 541 aaPredicted RBP8.56□□□□□ -1.04
CCL28-204ENST00000514421 FNIP1Q8TF40 1166 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 ALG3Q92685 438 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 IGSF8Q969P0 613 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 NTAN1Q96AB6 310 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 TTC17Q96AE7 1141 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 LMLNQ96KR4 655 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 PRICKLE1Q96MT3 831 aaPredicted RBP8.56□□□□□ -1.04
CCL28-204ENST00000514421 NAP1L3Q99457 506 aaPredicted RBP8.56□□□□□ -1.04
CCL28-204ENST00000514421 RHOXF2Q9BQY4 288 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 LRRC1Q9BTT6 524 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 NUP85Q9BW27 656 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 GOLPH3Q9H4A6 298 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 VIPAS39Q9H9C1 493 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 POLMQ9NP87 494 aaPredicted RBP8.56□□□□□ -1.04
CCL28-204ENST00000514421 GDF3Q9NR23 364 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 ABCB8Q9NUT2 735 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 POLR3BQ9NW08 1133 aaPredicted RBP8.56□□□□□ -1.04
CCL28-204ENST00000514421 C2orf42Q9NWW7 574 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 CTTNBP2NLQ9P2B4 639 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 GGA2Q9UJY4 613 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 VANGL2Q9ULK5 521 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 MMP17Q9ULZ9 603 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 PLA2G4CQ9UP65 541 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 PCDHA3Q9Y5H8 950 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 COL4A3Q01955 1670 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 IGLV3-10A0A075B6K4 115 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 A0A1B0GVM2 712 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 TCAF2A6NFQ2 919 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 I6L893 689 aaPredicted RBP8.55□□□□□ -1.04
CCL28-204ENST00000514421 SGK1O00141 431 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 ZBTB24O43167 697 aaPredicted RBP8.55□□□□□ -1.04
CCL28-204ENST00000514421 ADAM23O75077 832 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 SASH3O75995 380 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 RNF8O76064 485 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 ALDH1A2O94788 518 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 CHRM1P11229 460 aaPredicted RBP8.55□□□□□ -1.04
CCL28-204ENST00000514421 TDGF1P13385 188 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 PSMA2P25787 234 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 CD70P32970 193 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 CNR2P34972 360 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 PLK1P53350 603 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 AIF1P55008 147 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 CDH4P55283 916 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 OGDHQ02218 1023 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 NRG1Q02297 640 aaPredicted RBP8.55□□□□□ -1.04
CCL28-204ENST00000514421 LMAN2Q12907 356 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 SLC12A1Q13621 1099 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 CDH18Q13634 790 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 ACAP1Q15027 740 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 MAP9Q49MG5 647 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 RAB6CQ53S08 254 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 FSCBQ5H9T9 825 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 EGFLAMQ63HQ2 1017 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 TMEM215Q68D42 235 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 MBLAC2Q68D91 279 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 TMEM92Q6UXU6 159 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 LONP2Q86WA8 852 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 ZNF683Q8IZ20 524 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 UBL4BQ8N7F7 174 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 ZBTB44Q8NCP5 570 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 TSTD1Q8NFU3 115 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 ZNF564Q8TBZ8 553 aaPredicted RBP8.55□□□□□ -1.04
CCL28-204ENST00000514421 WFDC5Q8TCV5 224 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 AENQ8WTP8 325 aaKnown RBP8.55□□□□□ -1.04
CCL28-204ENST00000514421 ACOX2Q99424 681 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 PSMB7Q99436 277 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 CIPCQ9C0C6 399 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 RAB6CQ9H0N0 254 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 SEMA4AQ9H3S1 761 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 RETREG1Q9H6L5 497 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 TMPRSS4Q9NRS4 437 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 PPARGC1AQ9UBK2 798 aaKnown RBP8.55□□□□□ -1.04
CCL28-204ENST00000514421 OR12D3Q9UGF7 316 aa8.55□□□□□ -1.04
CCL28-204ENST00000514421 EBF1Q9UH73 591 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms