RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 C9orf64Q5T6V5 341 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 CEP135Q66GS9 1140 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 TCTN3Q6NUS6 607 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 SPNS3Q6ZMD2 512 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 Q6ZSR6 202 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 GPRIN1Q7Z2K8 1008 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 GDF7Q7Z4P5 450 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 WDR48Q8TAF3 677 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 CXorf38Q8TB03 319 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 TNFRSF25Q93038 417 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 CCDC74AQ96AQ1 378 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 TCEAL2Q9H3H9 227 aaPredicted RBP3.37□□□□□ -1.87
CHD1-211ENST00000514344 PDE11AQ9HCR9 933 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 DMAP1Q9NPF5 467 aaPredicted RBP3.37□□□□□ -1.87
CHD1-211ENST00000514344 NCKIPSDQ9NZQ3 722 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 PHTF1Q9UMS5 762 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 DMTF1Q9Y222 760 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 MAP4K5Q9Y4K4 846 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 ZNF106Q9H2Y7 1883 aaKnown RBP3.37□□□□□ -1.87
CHD1-211ENST00000514344 GOLGA8IPA6NC78 632 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 VWA3AA6NCI4 1184 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 POM121BA6NF01 834 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 GOLGA8JA6NMD2 632 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 H3BM21 787 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 KRT86O43790 486 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 BNIP3LO60238 219 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 CD2BP2O95400 341 aaKnown RBP3.37□□□□□ -1.87
CHD1-211ENST00000514344 C5AR1P21730 350 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 RPS6KB1P23443 525 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 RPIAP49247 311 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 SGSHP51688 502 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 COPB1P53618 953 aaKnown RBP3.37□□□□□ -1.87
CHD1-211ENST00000514344 NR6A1Q15406 480 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 ARHGAP44Q17R89 818 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 DCAF6Q58WW2 860 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 MMS22LQ6ZRQ5 1243 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 DPH6Q7L8W6 267 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 FAM35AQ86V20 835 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 DIS3L2Q8IYB7 885 aaKnown RBP3.37□□□□□ -1.87
CHD1-211ENST00000514344 MYCT1Q8N699 235 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 CACTINQ8WUQ7 758 aaKnown RBP3.37□□□□□ -1.87
CHD1-211ENST00000514344 STARD8Q92502 1023 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 TMEM74Q96NL1 305 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 FAM129BQ96TA1 746 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 CGRRF1Q99675 332 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 SLC2A11Q9BYW1 496 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.37□□□□□ -1.87
CHD1-211ENST00000514344 RBAKQ9NYW8 714 aaPredicted RBP3.37□□□□□ -1.87
CHD1-211ENST00000514344 SLCO3A1Q9UIG8 710 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 SALL4Q9UJQ4 1053 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 ITGA11Q9UKX5 1188 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 MRPS18BQ9Y676 258 aaKnown RBP3.37□□□□□ -1.87
CHD1-211ENST00000514344 KCNMB2Q9Y691 235 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 POLEQ07864 2286 aa3.37□□□□□ -1.87
CHD1-211ENST00000514344 A0A1W2PQU0 124 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 ZG16O60844 167 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 IL18RAPO95256 599 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 CSF2P04141 144 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 CCDC130P13994 396 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 NME1P15531 152 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 MZF1P28698 734 aaPredicted RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 CCKBRP32239 447 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 CLCN1P35523 988 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 DDIT3P35638 169 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 CTSOP43234 321 aaPredicted RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 ADKP55263 362 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 CNTN1Q12860 1018 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 PDE1CQ14123 709 aaPredicted RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 FZD2Q14332 565 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 C16orf72Q14CZ0 275 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 TESK1Q15569 626 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 WDR72Q3MJ13 1102 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 TSGA10IPQ3SY00 556 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 ESRP1Q6NXG1 681 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 THSD4Q6ZMP0 1018 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 PARGQ86W56 976 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 ZMIZ2Q8NF64 920 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 OR5B17Q8NGF7 314 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 FAM174AQ8TBP5 190 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 ART4Q93070 314 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 ELMO3Q96BJ8 720 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 C19orf60Q96EN9 201 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 TMA16Q96EY4 203 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 SMARCD1Q96GM5 515 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 SLC45A3Q96JT2 553 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 AGXT2Q9BYV1 514 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 SEMA6CQ9H3T2 930 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 FBXO44Q9H4M3 255 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 RUBCNLQ9H714 662 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 STIM2Q9P246 746 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 APOBEC3BQ9UH17 382 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 IPO11Q9UI26 975 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 TLK1Q9UKI8 766 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 SARDHQ9UL12 918 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 DOLKQ9UPQ8 538 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 B3GALT1Q9Y5Z6 326 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 MDC1Q14676 2089 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 TRPM6Q9BX84 2022 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 MN1Q10571 1320 aaPredicted RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 ARHGEF17Q96PE2 2063 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms