RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	R3HDM4	Q96D70	268 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	REPS1	Q96D71	796 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	TRMT61A	Q96FX7	289 aa	Known RBP	3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	ASB2	Q96Q27	587 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	SNX18	Q96RF0	628 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	SDF4	Q9BRK5	362 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	RMI1	Q9H9A7	625 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	IL21R	Q9HBE5	538 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	PDE11A	Q9HCR9	933 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	SMYD2	Q9NRG4	433 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	DIAPH3	Q9NSV4	1193 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	NKIRAS2	Q9NYR9	191 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	SERGEF	Q9UGK8	458 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	AMFR	Q9UKV5	643 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	RAB21	Q9UL25	225 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	SLC12A4	Q9UP95	1085 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	OSGIN2	Q9Y236	505 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	RCE1	Q9Y256	329 aa		3.74	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	KDM3A	Q9Y4C1	1321 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	AGAP5	A6NIR3	686 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	FAM90A7P	A6NKC0	464 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	FAM90A22P	A8MWA6	464 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	FAM90A12P	A8MX19	464 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	FAM90A23P	A8MXZ1	464 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	TMEM232	C9JQI7	657 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267		H3BNC9	293 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	TNPO2	O14787	897 aa	Known RBP	3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	DOK2	O60496	412 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	PTP4A3	O75365	173 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	CCNDBP1	O95273	360 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	PDHA1	P08559	390 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	PRR35	P0CG20	571 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	TMIGD3	P0DMS9	266 aa	Predicted RBP	3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	LAMP2	P13473	410 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	ALAD	P13716	330 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	ENG	P17813	658 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	PRKCH	P24723	683 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	EPHA8	P29322	1005 aa	Predicted RBP	3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	EPHB2	P29323	1055 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	HOXD13	P35453	343 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	CLCN2	P51788	898 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	SSBP2	P81877	361 aa	Predicted RBP	3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	TFF2	Q03403	129 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	CCDC15	Q0P6D6	951 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	LAMB3	Q13751	1172 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	GPR162	Q16538	588 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	ZNF766	Q5HY98	468 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	MTX3	Q5HYI7	312 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	SNX30	Q5VWJ9	437 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	ATF7IP	Q6VMQ6	1270 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	SYNE3	Q6ZMZ3	975 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	KRT77	Q7Z794	578 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	CPLX4	Q7Z7G2	160 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	ENDOV	Q8N8Q3	282 aa	Known RBP	3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	ADPRHL1	Q8NDY3	354 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	SRFBP1	Q8NEF9	429 aa	Known RBP	3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	TNIP2	Q8NFZ5	429 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	ETNPPL	Q8TBG4	499 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	DENND1A	Q8TEH3	1009 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	SCARB1	Q8WTV0	552 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	CUL5	Q93034	780 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	NSUN4	Q96CB9	384 aa	Known RBP	3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	LENG8	Q96PV6	779 aa	Predicted RBP	3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	PRR25	Q96S07	402 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	FAM118B	Q9BPY3	351 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	TMEM79	Q9BSE2	394 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	HERC2P3	Q9BVR0	1158 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	GHITM	Q9H3K2	345 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	PRKRIP1	Q9H875	184 aa	Predicted RBP	3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	VEZT	Q9HBM0	779 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	SLC22A11	Q9NSA0	550 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	ALKBH4	Q9NXW9	302 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	MGAT4C	Q9UBM8	478 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	VPS28	Q9UK41	221 aa		3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	COPG1	Q9Y678	874 aa	Known RBP	3.73	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	NACAD	O15069	1562 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	GTPBP1	O00178	669 aa	Known RBP	3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	GRM8	O00222	908 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	ZNF213	O14771	459 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	PLOD3	O60568	738 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	BMP15	O95972	392 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	ERBB2	P04626	1255 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	UBL4A	P11441	157 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	HOXD12	P35452	270 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	ARL3	P36405	182 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	MMP13	P45452	471 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	RARS	P54136	660 aa	Known RBP	3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	KRTAP10-11	P60412	298 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	E2F1	Q01094	437 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	CUL4A	Q13619	759 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	LRRC24	Q50LG9	513 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	RUNDC3A	Q59EK9	446 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	FAM69A	Q5T7M9	428 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	PXDC1	Q5TGL8	231 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	PAPD7	Q5XG87	772 aa	Known RBP	3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	KIRREL2	Q6UWL6	708 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	ZNF813	Q6ZN06	617 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	GALNT5	Q7Z7M9	940 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	LSMEM1	Q8N8F7	131 aa		3.72	□□□□□ -1.81
CALCOCO2-223	ENST00000514267	TERB1	Q8NA31	727 aa		3.72	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms