RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 K7ESM1 405 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 SCAMP1O15126 338 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 EFSO43281 561 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 CUTAO60888 179 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 SETSIPP0DME0 302 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 MLLT3P42568 568 aaPredicted RBP11.29□□□□□ -0.6
DDX41-216ENST00000513562 AFMP43652 599 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 TAS2R38P59533 333 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 CNTN1Q12860 1018 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 NFIL3Q16649 462 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 DCAF6Q58WW2 860 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 FAM46CQ5VWP2 391 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 GRAMD1CQ8IYS0 662 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 SLC22A18ASQ8N1D0 253 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 CFAP52Q8N1V2 620 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 OR13H1Q8NG92 308 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 IRGQQ8WZA9 623 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 IFT43Q96FT9 208 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 FCRL2Q96LA5 508 aaPredicted RBP11.29□□□□□ -0.6
DDX41-216ENST00000513562 CCNL2Q96S94 520 aaPredicted RBP11.29□□□□□ -0.6
DDX41-216ENST00000513562 MYOCQ99972 504 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 ZSCAN16Q9H4T2 348 aaPredicted RBP11.29□□□□□ -0.6
DDX41-216ENST00000513562 MMRN2Q9H8L6 949 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 EXOC1Q9NV70 894 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 HESX1Q9UBX0 185 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 ATXN7L1Q9ULK2 861 aaPredicted RBP11.29□□□□□ -0.6
DDX41-216ENST00000513562 MTMR6Q9Y217 621 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 TRAF3IP3Q9Y228 551 aa11.29□□□□□ -0.6
DDX41-216ENST00000513562 NEMP2A6NFY4 417 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 C1QTNF3-AMACRE9PGA6 284 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
DDX41-216ENST00000513562 SUV39H1O43463 412 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 CALUO43852 315 aaPredicted RBP11.28□□□□□ -0.6
DDX41-216ENST00000513562 GABBR2O75899 941 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 ITGB2P05107 769 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 KRT13P13646 458 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 PDIA4P13667 645 aaKnown RBP11.28□□□□□ -0.6
DDX41-216ENST00000513562 LCP1P13796 627 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 PRLRP16471 622 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 NR2F2P24468 414 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 GTF2H1P32780 548 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 NNMTP40261 264 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 VASPP50552 380 aaPredicted RBP11.28□□□□□ -0.6
DDX41-216ENST00000513562 MCCD1P59942 119 aaPredicted RBP11.28□□□□□ -0.6
DDX41-216ENST00000513562 NNTQ13423 1086 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 ZNF284Q2VY69 593 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 ZSCAN23Q3MJ62 389 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 KRT39Q6A163 491 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 ZCCHC8Q6NZY4 707 aaKnown RBP11.28□□□□□ -0.6
DDX41-216ENST00000513562 RBM44Q6ZP01 1051 aaKnown RBP11.28□□□□□ -0.6
DDX41-216ENST00000513562 ARL14Q8N4G2 192 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 OR8D1Q8WZ84 308 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 SLC39A13Q96H72 371 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 CALN1Q9BXU9 219 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 NCKIPSDQ9NZQ3 722 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 PPM1HQ9ULR3 514 aa11.28□□□□□ -0.6
DDX41-216ENST00000513562 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.27□□□□□ -0.61
DDX41-216ENST00000513562 A0A1W2PQU0 124 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 O00370 1275 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 ALOX15BO15296 676 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 SLC31A1O15431 190 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 TCEA3O75764 348 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 NEBLO76041 1014 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 TNFSF15O95150 251 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 YEATS4O95619 227 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 LTFP02788 710 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 ITGA2BP08514 1039 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 ITGB6P18564 788 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 HNRNPA2B1P22626 353 aaKnown RBP11.27□□□□□ -0.61
DDX41-216ENST00000513562 AKT2P31751 481 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 PDX1P52945 283 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 HNRNPKP61978 463 aaKnown RBP eCLIP11.27□□□□□ -0.61
DDX41-216ENST00000513562 NFKB2Q00653 900 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 SULT2A1Q06520 285 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 ZNF177Q13360 481 aaPredicted RBP11.27□□□□□ -0.61
DDX41-216ENST00000513562 SLC12A1Q13621 1099 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 PIP5KL1Q5T9C9 394 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 NEK5Q6P3R8 708 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 GUSBP11Q6P575 273 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 GCNT7Q6ZNI0 430 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 ABI3BPQ7Z7G0 1075 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 FAM186BQ8IYM0 893 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 FBXL13Q8NEE6 735 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 ZNF548Q8NEK5 533 aaPredicted RBP11.27□□□□□ -0.61
DDX41-216ENST00000513562 TPCN2Q8NHX9 752 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 WDR36Q8NI36 951 aaKnown RBP11.27□□□□□ -0.61
DDX41-216ENST00000513562 UBA3Q8TBC4 463 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 DQX1Q8TE96 717 aaKnown RBP11.27□□□□□ -0.61
DDX41-216ENST00000513562 EEF2KMTQ96G04 330 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 SERPINB11Q96P15 392 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 NOX5Q96PH1 765 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 FZD3Q9NPG1 666 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 GPR27Q9NS67 375 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 RAB20Q9NX57 234 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 ANKMY1Q9P2S6 941 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 XPO7Q9UIA9 1087 aaKnown RBP11.27□□□□□ -0.61
DDX41-216ENST00000513562 TLR6Q9Y2C9 796 aa11.27□□□□□ -0.61
DDX41-216ENST00000513562 ARID1BQ8NFD5 2236 aaPredicted RBP11.27□□□□□ -0.61
DDX41-216ENST00000513562 RELNP78509 3460 aa11.26□□□□□ -0.61
DDX41-216ENST00000513562 MCF2LO15068 1137 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms