RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 PRKD2Q9BZL6 878 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 CLPBQ9H078 707 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 ALG9Q9H6U8 611 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 GPBP1L1Q9HC44 474 aaPredicted RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 SNX15Q9NRS6 342 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 NMRK1Q9NWW6 199 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 CLIC5Q9NZA1 410 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 CHKBQ9Y259 395 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 EIF3LQ9Y262 564 aaKnown RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 EFR3BQ9Y2G0 817 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 PLLPQ9Y342 182 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 SNCAIPQ9Y6H5 919 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 KAT6AQ92794 2004 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 DPYSL4O14531 572 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 CLOCKO15516 846 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 DEAF1O75398 565 aaPredicted RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 SNUPNO95149 360 aaKnown RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 CRTAMO95727 393 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 GUCA1CO95843 209 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 TRPC1P48995 793 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 JAG1P78504 1218 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 PTP4A2Q12974 167 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 KRT72Q14CN4 511 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 ADRM1Q16186 407 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 CYP1B1Q16678 543 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 TREML2Q5T2D2 321 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 NET1Q7Z628 596 aaPredicted RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 TTC7BQ86TV6 843 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 HORMAD1Q86X24 394 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 LPCAT1Q8NF37 534 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 TRPM4Q8TD43 1214 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 ACMSDQ8TDX5 336 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 ZNF516Q92618 1163 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 OTULINQ96BN8 352 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 GRIP2Q9C0E4 1043 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 WDR55Q9H6Y2 383 aaPredicted RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 GOLGA2P5Q9HBQ8 144 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 DDX28Q9NUL7 540 aaKnown RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 SCN3BQ9NY72 215 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 MYPNQ86TC9 1320 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 CFAP99D6REC4 459 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 MAN1A2O60476 641 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 C2P06681 752 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 RHOCP08134 193 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 SERPINA6P08185 405 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 HNRNPLP14866 589 aaKnown RBP eCLIP8.19□□□□□ -1.1
NEK1-208ENST00000512193 MATKP42679 507 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 GDF10P55107 478 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 FSTL1Q12841 308 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 TTLL9Q3SXZ7 439 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 TXNRD3NBQ6F5E7 133 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 ZFP1Q6P2D0 407 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 LZTR1Q8N653 840 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 PLEKHO2Q8TD55 490 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 EIF2AQ9BY44 585 aaKnown RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 NXF3Q9H4D5 531 aaKnown RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 SPASTQ9UBP0 616 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 LGALS13Q9UHV8 139 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 DSEQ9UL01 958 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 SH3BP1Q9Y3L3 701 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 AP4S1Q9Y587 144 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 NRXN3Q9Y4C0 1643 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 SYNCRIPO60506 623 aaKnown RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 RASSF9O75901 435 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 TNFAIP8O95379 198 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 APOA1P02647 267 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 MYL4P12829 197 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 TCF4P15884 667 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 LRPAP1P30533 357 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 PSEN2P49810 448 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 MAPK10P53779 464 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 WASHC5Q12768 1159 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 NAB1Q13506 487 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 PPM1JQ5JR12 505 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 PCID2Q5JVF3 399 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 CERCAMQ5T4B2 595 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 CACHD1Q5VU97 1274 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 UGT3A1Q6NUS8 523 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 PMF1Q6P1K2 205 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 ADGRD1Q6QNK2 874 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 ADCK2Q7Z695 626 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 DHDDSQ86SQ9 333 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 FNDC5Q8NAU1 212 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 RCN3Q96D15 328 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 RMND5BQ96G75 393 aaPredicted RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 NSMCE2Q96MF7 247 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 CSPG4P5Q96PW8 444 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 NTPCRQ9BSD7 190 aaKnown RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 SLC25A23Q9BV35 468 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 HPS4Q9NQG7 708 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 SMPD4Q9NXE4 827 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 XPR1Q9UBH6 696 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 VPS28Q9UK41 221 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 KANSL1LA0AUZ9 987 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 MGRN1O60291 552 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 CILPO75339 1184 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 ATP5BP06576 529 aaKnown RBP8.18□□□□□ -1.1
NEK1-208ENST00000512193 PIRTP0C851 137 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 ARL2P36404 184 aa8.18□□□□□ -1.1
NEK1-208ENST00000512193 GABRB2P47870 512 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms