RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 PPM1JQ5JR12 505 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 FAM72AQ5TYM5 149 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 ACAD10Q6JQN1 1059 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 FAM72DQ6L9T8 149 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 DNAJC24Q6P3W2 148 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 SLC23A3Q6PIS1 610 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 WDR59Q6PJI9 974 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 LRRC31Q6UY01 552 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 LINGO4Q6UY18 593 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 ZNF571Q7Z3V5 609 aaPredicted RBP13.65□□□□□ -0.22
RNF4-215ENST00000511843 FAM72BQ86X60 149 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 DRC7Q8IY82 874 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 MCOLN2Q8IZK6 566 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 ZCCHC9Q8N567 271 aaKnown RBP13.65□□□□□ -0.22
RNF4-215ENST00000511843 C3orf20Q8ND61 904 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 OR7D4Q8NG98 312 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 FRS2Q8WU20 508 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 FAM172AQ8WUF8 416 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 MCEEQ96PE7 176 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 HAPLN3Q96S86 360 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 FAM129BQ96TA1 746 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 GTPBP2Q9BX10 602 aaKnown RBP13.65□□□□□ -0.22
RNF4-215ENST00000511843 TTYH3Q9C0H2 523 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 PABPC3Q9H361 631 aaKnown RBP13.65□□□□□ -0.22
RNF4-215ENST00000511843 TMEM9BQ9NQ34 198 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 EVLQ9UI08 416 aaPredicted RBP13.65□□□□□ -0.22
RNF4-215ENST00000511843 SLC25A13Q9UJS0 675 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 TBC1D30Q9Y2I9 924 aa13.65□□□□□ -0.22
RNF4-215ENST00000511843 CACNA1EQ15878 2313 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 IGLV3-10A0A075B6K4 115 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 A0A1W2PP55 124 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 FAM47DPA6NHR8 397 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 METTL12A8MUP2 240 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 K7ERQ8 282 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 TM4SF5O14894 197 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 BNIP3LO60238 219 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 MT-CO1P00395 513 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 SERPINF2P08697 491 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 OR1E1P30953 314 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 ADRA1BP35368 520 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 PTPN9P43378 593 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 OXCT1P55809 520 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 GSCP56915 257 aaPredicted RBP13.64□□□□□ -0.23
RNF4-215ENST00000511843 OGDHQ02218 1023 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 C1QBPQ07021 282 aaKnown RBP13.64□□□□□ -0.23
RNF4-215ENST00000511843 MTA1Q13330 715 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 ARID5BQ14865 1188 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 POM121L1PQ3SYA9 428 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 TTC31Q49AM3 519 aaPredicted RBP13.64□□□□□ -0.23
RNF4-215ENST00000511843 ACCSLQ4AC99 568 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 SYCP2LQ5T4T6 812 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 SFMBT2Q5VUG0 894 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 Q6ZVU0 165 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 PYROXD2Q8N2H3 581 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 AADATQ8N5Z0 425 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 KDM1BQ8NB78 822 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 CENPIQ92674 756 aaPredicted RBP13.64□□□□□ -0.23
RNF4-215ENST00000511843 FOXJ1Q92949 421 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 C1orf74Q96LT6 269 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 HAUS4Q9H6D7 363 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 FBRSQ9HAH7 460 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 CAPN10Q9HC96 672 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 FBXL12Q9NXK8 326 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 ZNF212Q9UDV6 495 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 EIF2B4Q9UI10 523 aaKnown RBP13.64□□□□□ -0.23
RNF4-215ENST00000511843 VPS51Q9UID3 782 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 MYO6Q9UM54 1294 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 SLC6A14Q9UN76 642 aa13.64□□□□□ -0.23
RNF4-215ENST00000511843 TARSL2A2RTX5 802 aaKnown RBP13.63□□□□□ -0.23
RNF4-215ENST00000511843 SIGLEC16A6NMB1 481 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 GIPC1O14908 333 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 RNASEH1O60930 286 aaKnown RBP13.63□□□□□ -0.23
RNF4-215ENST00000511843 RNASEH2AO75792 299 aaKnown RBP13.63□□□□□ -0.23
RNF4-215ENST00000511843 SEMA4FO95754 770 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 CCDC172P0C7W6 258 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 SLC8A1P32418 973 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 HOXD12P35452 270 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 NNMTP40261 264 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 TPM4P67936 248 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 ZBTB16Q05516 673 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 SULT2A1Q06520 285 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 KLHL30Q0D2K2 578 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 DLG2Q15700 870 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 WDR45BQ5MNZ6 344 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 PPP1R15BQ5SWA1 713 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 RWDD4Q6NW29 188 aaKnown RBP13.63□□□□□ -0.23
RNF4-215ENST00000511843 SCYL2Q6P3W7 929 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 STRADAQ7RTN6 431 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 DNASE2BQ8WZ79 361 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 SPON2Q9BUD6 331 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 ZYG11BQ9C0D3 744 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 BTBD1Q9H0C5 482 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 NEUROG2Q9H2A3 272 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 NDFIP2Q9NV92 336 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 AIPL1Q9NZN9 384 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 IFNKQ9P0W0 207 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 OR12D3Q9UGF7 316 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 NEU3Q9UQ49 428 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 ACTL7AQ9Y615 435 aa13.63□□□□□ -0.23
RNF4-215ENST00000511843 CNOT1A5YKK6 2376 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms