RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 BNIPLQ7Z465 357 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 C14orf80Q86SX3 495 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 ERICH1Q86X53 443 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 ZNF677Q86XU0 584 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 TMEM139Q8IV31 216 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 ZNF683Q8IZ20 524 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 ZCCHC9Q8N567 271 aaKnown RBP10.6□□□□□ -0.71
PFDN1-203ENST00000510217 MINDY1Q8N5J2 469 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 CPA5Q8WXQ8 436 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 ZNF592Q92610 1267 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 RPL10LQ96L21 214 aaKnown RBP10.6□□□□□ -0.71
PFDN1-203ENST00000510217 RPRD1AQ96P16 312 aaPredicted RBP10.6□□□□□ -0.71
PFDN1-203ENST00000510217 GTPBP2Q9BX10 602 aaKnown RBP10.6□□□□□ -0.71
PFDN1-203ENST00000510217 TKTL2Q9H0I9 626 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 PCED1AQ9H1Q7 454 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 PABPC3Q9H361 631 aaKnown RBP10.6□□□□□ -0.71
PFDN1-203ENST00000510217 C6orf106Q9H6K1 298 aaPredicted RBP10.6□□□□□ -0.71
PFDN1-203ENST00000510217 NLRC4Q9NPP4 1024 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 TRMT1Q9NXH9 659 aaKnown RBP10.6□□□□□ -0.71
PFDN1-203ENST00000510217 SERGEFQ9UGK8 458 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 SUN2Q9UH99 717 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 TMEM59LQ9UK28 342 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 VANGL2Q9ULK5 521 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 STAP1Q9ULZ2 295 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 DAAM1Q9Y4D1 1078 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 SLCO1B1Q9Y6L6 691 aa10.6□□□□□ -0.71
PFDN1-203ENST00000510217 TMEM131Q92545 1883 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 DOCK4Q8N1I0 1966 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 EDDM13A0A1B0GTR0 161 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 A0A1B0GTW7 788 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 MID1O15344 667 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 GJB3O75712 270 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 SEMA4FO95754 770 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 DNTTP04053 509 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 CYP1A1P04798 512 aaPredicted RBP10.59□□□□□ -0.71
PFDN1-203ENST00000510217 VAV1P15498 845 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 GNSP15586 552 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 PLK1P53350 603 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 ETF1P62495 437 aaKnown RBP10.59□□□□□ -0.71
PFDN1-203ENST00000510217 CDR2Q01850 454 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 DEUP1Q05D60 604 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 ZNF252P-AS1Q0IIN9 211 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 GRIK2Q13002 908 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 SEMA3BQ13214 749 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 CST6Q15828 149 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 SLC25A52Q3SY17 297 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 C5orf22Q49AR2 442 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 ALFQ53S48 1182 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 PIP4P1Q86T03 277 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 MSANTD4Q8NCY6 345 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 DEFB124Q8NES8 71 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 C1orf216Q8TAB5 229 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 FRS2Q8WU20 508 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 ALG14Q96F25 216 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 CFAP57Q96MR6 1250 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 CNTNAP3BQ96NU0 1288 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 PANX2Q96RD6 677 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 BAG1Q99933 345 aaPredicted RBP10.59□□□□□ -0.71
PFDN1-203ENST00000510217 CNTNAP3Q9BZ76 1288 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 BTBD1Q9H0C5 482 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 WDCPQ9H6R7 721 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 METTL5Q9NRN9 209 aaKnown RBP10.59□□□□□ -0.71
PFDN1-203ENST00000510217 TMPRSS4Q9NRS4 437 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 DNAAF2Q9NVR5 837 aaKnown RBP10.59□□□□□ -0.71
PFDN1-203ENST00000510217 EIF2B4Q9UI10 523 aaKnown RBP10.59□□□□□ -0.71
PFDN1-203ENST00000510217 SLCO3A1Q9UIG8 710 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.59□□□□□ -0.71
PFDN1-203ENST00000510217 OR51B4Q9Y5P0 310 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 SNX10Q9Y5X0 201 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 ASCC3Q8N3C0 2202 aaKnown RBP10.59□□□□□ -0.71
PFDN1-203ENST00000510217 SPTBN2O15020 2390 aa10.59□□□□□ -0.71
PFDN1-203ENST00000510217 TARSL2A2RTX5 802 aaKnown RBP10.58□□□□□ -0.72
PFDN1-203ENST00000510217 UPK3BL1B0FP48 263 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 UPK3BL2E5RIL1 263 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 OPHN1O60890 802 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 CLDN11O75508 207 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 CNTN5O94779 1100 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 SYPP08247 313 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 CEACAM1P13688 526 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 MMP8P22894 467 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 RDXP35241 583 aaKnown RBP10.58□□□□□ -0.72
PFDN1-203ENST00000510217 PBX1P40424 430 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 PSMD8P48556 350 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 ATXN3P54252 364 aaPredicted RBP10.58□□□□□ -0.72
PFDN1-203ENST00000510217 CDH4P55283 916 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 GSCP56915 257 aaPredicted RBP10.58□□□□□ -0.72
PFDN1-203ENST00000510217 BNC1Q01954 994 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 SULT2A1Q06520 285 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 PTP4A2Q12974 167 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 TRIM14Q14142 442 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 NR1I3Q14994 352 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 RAB6CQ53S08 254 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 RNF219Q5W0B1 726 aaPredicted RBP10.58□□□□□ -0.72
PFDN1-203ENST00000510217 USP30Q70CQ3 517 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 MMAAQ8IVH4 418 aaKnown RBP10.58□□□□□ -0.72
PFDN1-203ENST00000510217 AADATQ8N5Z0 425 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 EMC1Q8N766 993 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 TC2NQ8N9U0 490 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 ANKRD20A12PQ8NF67 263 aa10.58□□□□□ -0.72
PFDN1-203ENST00000510217 SNX19Q92543 992 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms