RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 USP12O75317 370 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 IL1BP01584 269 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 GIMD1P0DJR0 217 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 SETSIPP0DME0 302 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 DGKAP23743 735 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 PSMC2P35998 433 aaKnown RBP9.7□□□□□ -0.86
NEDD9-211ENST00000508546 NNMTP40261 264 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 RIPPLY3P57055 190 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 TBX4P57082 545 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 SKOR1P84550 965 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 NNTQ13423 1086 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 SETMARQ53H47 684 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-211ENST00000508546 MS4A13Q5J8X5 152 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 RNF219Q5W0B1 726 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-211ENST00000508546 INO80CQ6PI98 192 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-211ENST00000508546 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-211ENST00000508546 MMS22LQ6ZRQ5 1243 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 CARNMT1Q8N4J0 409 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 EXD3Q8N9H8 876 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 TMEM145Q8NBT3 493 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 FBXL13Q8NEE6 735 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 GRAMD1AQ96CP6 724 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 MYEOVQ96EZ4 313 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 KLHDC7BQ96G42 594 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 PAGE5Q96GU1 130 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 SPAG5Q96R06 1193 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 MMRN2Q9H8L6 949 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 USP29Q9HBJ7 922 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 KLHL11Q9NVR0 708 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 RAB20Q9NX57 234 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 SERTAD1Q9UHV2 236 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 CLEC18AA5D8T8 446 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 O00370 1275 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 ACTN4O43707 911 aaKnown RBP9.69□□□□□ -0.86
NEDD9-211ENST00000508546 RTN2O75298 545 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 CSO75390 466 aaKnown RBP9.69□□□□□ -0.86
NEDD9-211ENST00000508546 GABBR2O75899 941 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 PIAS2O75928 621 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 LTFP02788 710 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 MYL1P05976 194 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 VDRP11473 427 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 RPL13P26373 211 aaKnown RBP9.69□□□□□ -0.86
NEDD9-211ENST00000508546 MAT2AP31153 395 aaKnown RBP9.69□□□□□ -0.86
NEDD9-211ENST00000508546 MXI1P50539 228 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 VASPP50552 380 aaPredicted RBP9.69□□□□□ -0.86
NEDD9-211ENST00000508546 DUSP3P51452 185 aaPredicted RBP9.69□□□□□ -0.86
NEDD9-211ENST00000508546 KCNMA1Q12791 1236 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 SERINC3Q13530 473 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 SLC12A1Q13621 1099 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 DCAF6Q58WW2 860 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 FAM46CQ5VWP2 391 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 CLEC18BQ6UXF7 455 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 DSG4Q86SJ6 1040 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 APCDD1Q8J025 514 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 CLEC18CQ8NCF0 446 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 UBA3Q8TBC4 463 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 FRS2Q8WU20 508 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 SLC35F5Q8WV83 523 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 CCDC97Q96F63 343 aaPredicted RBP9.69□□□□□ -0.86
NEDD9-211ENST00000508546 IFT43Q96FT9 208 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 SLC39A13Q96H72 371 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 VCPIP1Q96JH7 1222 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 RPL10LQ96L21 214 aaKnown RBP9.69□□□□□ -0.86
NEDD9-211ENST00000508546 FCRL2Q96LA5 508 aaPredicted RBP9.69□□□□□ -0.86
NEDD9-211ENST00000508546 NUCKS1Q9H1E3 243 aaKnown RBP9.69□□□□□ -0.86
NEDD9-211ENST00000508546 PREBQ9HCU5 417 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 EVA1BQ9NVM1 165 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 UCKL1Q9NWZ5 548 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 NLGN3Q9NZ94 848 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 TJP2Q9UDY2 1190 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 KIAA1257Q9ULG3 409 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 PCDHA7Q9UN72 937 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 TLR6Q9Y2C9 796 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 CEP83Q9Y592 693 aa9.69□□□□□ -0.86
NEDD9-211ENST00000508546 RIOK3O14730 519 aaKnown RBP9.68□□□□□ -0.86
NEDD9-211ENST00000508546 ALOX15BO15296 676 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 STX10O60499 249 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 AFPP02771 609 aaKnown RBP9.68□□□□□ -0.86
NEDD9-211ENST00000508546 THEGLP0DJG4 465 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 ALPPL2P10696 532 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 LCP1P13796 627 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 CD19P15391 556 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 VAV1P15498 845 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 STK19P49842 368 aaPredicted RBP9.68□□□□□ -0.86
NEDD9-211ENST00000508546 PLK1P53350 603 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 METAP1P53582 386 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 YWHAEP62258 255 aaKnown RBP9.68□□□□□ -0.86
NEDD9-211ENST00000508546 SULT2A1Q06520 285 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 ADAM9Q13443 819 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 ISXQ2M1V0 245 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 AGBL4Q5VU57 503 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 NEK5Q6P3R8 708 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 LCLAT1Q6UWP7 414 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 TMC6Q7Z403 805 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 CFAP52Q8N1V2 620 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 OR8D1Q8WZ84 308 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 EEF2KMTQ96G04 330 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 APOLD1Q96LR9 279 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 SLC46A1Q96NT5 459 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 SERPINB11Q96P15 392 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms