RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, humanhuman

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-208ENST00000508492 TMEM270Q6UE05 265 aa8.12□□□□□ -1.11
SH3D19-208ENST00000508492 DDX42Q86XP3 938 aaKnown RBP eCLIP8.12□□□□□ -1.11
SH3D19-208ENST00000508492 IRF2BP1Q8IU81 584 aa8.12□□□□□ -1.11
SH3D19-208ENST00000508492 SYNPOQ8N3V7 929 aa8.12□□□□□ -1.11
SH3D19-208ENST00000508492 FRMD1Q8N878 549 aa8.12□□□□□ -1.11
SH3D19-208ENST00000508492 ANKRD52Q8NB46 1076 aa8.12□□□□□ -1.11
SH3D19-208ENST00000508492 WFDC12Q8WWY7 111 aa8.12□□□□□ -1.11
SH3D19-208ENST00000508492 CNOT6LQ96LI5 555 aaKnown RBP8.12□□□□□ -1.11
SH3D19-208ENST00000508492 CRACR2AQ9BSW2 395 aa8.12□□□□□ -1.11
SH3D19-208ENST00000508492 FAM126AQ9BYI3 521 aaPredicted RBP8.12□□□□□ -1.11
SH3D19-208ENST00000508492 INTS2Q9H0H0 1204 aaKnown RBP8.12□□□□□ -1.11
SH3D19-208ENST00000508492 METTL14Q9HCE5 456 aaKnown RBP8.12□□□□□ -1.11
SH3D19-208ENST00000508492 PNPLA8Q9NP80 782 aa8.12□□□□□ -1.11
SH3D19-208ENST00000508492 CD93Q9NPY3 652 aa8.12□□□□□ -1.11
SH3D19-208ENST00000508492 ARHGEF4Q9NR80 690 aa8.12□□□□□ -1.11
SH3D19-208ENST00000508492 SPHK2Q9NRA0 654 aa8.12□□□□□ -1.11
SH3D19-208ENST00000508492 CLEC4EQ9ULY5 219 aa8.12□□□□□ -1.11
SH3D19-208ENST00000508492 SLC8A2Q9UPR5 921 aa8.12□□□□□ -1.11
SH3D19-208ENST00000508492 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.12□□□□□ -1.11
SH3D19-208ENST00000508492 ASCC3Q8N3C0 2202 aaKnown RBP8.12□□□□□ -1.11
SH3D19-208ENST00000508492 PLXNA2O75051 1894 aa8.12□□□□□ -1.11
SH3D19-208ENST00000508492 YJEFN3A6XGL0 299 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 E7ENQ6 273 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 SLC9A3R1O14745 358 aaPredicted RBP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 XPO1O14980 1071 aaKnown RBP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 HOXC11O43248 304 aaPredicted RBP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 RPP40O75818 363 aaKnown RBP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 KAT7O95251 611 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 KLF8O95600 359 aaPredicted RBP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 AFPP02771 609 aaKnown RBP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 APODP05090 189 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 PNMA6AP0CW24 399 aaPredicted RBP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 VDRP11473 427 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 LCP1P13796 627 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 SLC9A1P19634 815 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 BCKDHBP21953 392 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 NOS3P29474 1203 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 CORO1AP31146 461 aaKnown RBP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 ID4P47928 161 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 ZNF132P52740 706 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 BCAT1P54687 386 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 YWHAGP61981 247 aaKnown RBP eCLIP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 RNF4P78317 190 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 AMPD2Q01433 879 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 BST2Q10589 180 aaKnown RBP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 PPP2R5DQ14738 602 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 SF3A2Q15428 464 aaKnown RBP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 ANO7Q6IWH7 933 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 PMF1Q6P1K2 205 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 HTR3DQ70Z44 454 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 CEP68Q76N32 757 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 SYT13Q7L8C5 426 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 CREBRFQ8IUR6 639 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 TMEM151AQ8N4L1 468 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 TERB1Q8NA31 727 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 IL17RCQ8NAC3 791 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 TXNDC5Q8NBS9 432 aaKnown RBP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 MDGA1Q8NFP4 955 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 BAHD1Q8TBE0 780 aaPredicted RBP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 GAB3Q8WWW8 586 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 SECISBP2LQ93073 1101 aaKnown RBP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 PNKPQ96T60 521 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 ACOX2Q99424 681 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 BBS2Q9BXC9 721 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 SEMA6CQ9H3T2 930 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 CLSTN2Q9H4D0 955 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 RXFP3Q9NSD7 469 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 DNAJC17Q9NVM6 304 aaKnown RBP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 TBC1D14Q9P2M4 693 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 SFMBT1Q9UHJ3 866 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 CYTH4Q9UIA0 394 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 MMP17Q9ULZ9 603 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 USP18Q9UMW8 372 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.11□□□□□ -1.11
SH3D19-208ENST00000508492 PCDH15Q96QU1 1955 aa8.11□□□□□ -1.11
SH3D19-208ENST00000508492 CNOT1A5YKK6 2376 aaKnown RBP8.1□□□□□ -1.11
SH3D19-208ENST00000508492 SLC12A8A0AV02 714 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 BICDL2A1A5D9 508 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 ANKRD34BA5PLL1 514 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 BECN2A8MW95 431 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 PRRT4C9JH25 899 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 M0QYV0 167 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 AGRPO00253 132 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 PMM2O15305 246 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 ZBED1O96006 694 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 CCDC192P0DO97 292 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 TYRP14679 529 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 TRIM21P19474 475 aaKnown RBP8.1□□□□□ -1.11
SH3D19-208ENST00000508492 TBXAS1P24557 533 aaPredicted RBP8.1□□□□□ -1.11
SH3D19-208ENST00000508492 COL8A1P27658 744 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 HOXA6P31267 233 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 ETV3P41162 512 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 PPP1R2P41236 205 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 SGSHP51688 502 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 DGKEP52429 567 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 DAOAP59103 153 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 GAD2Q05329 585 aa8.1□□□□□ -1.11
SH3D19-208ENST00000508492 RSPO4Q2I0M5 234 aaPredicted RBP8.1□□□□□ -1.11
SH3D19-208ENST00000508492 FBXO43Q4G163 708 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms