RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 LSP1P33241 339 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 NDST1P52848 882 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 RAB15P59190 212 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ACTN3Q08043 901 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 FOXM1Q08050 763 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CAMK2GQ13555 558 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CCNG2Q16589 344 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 HIST2H2ACQ16777 129 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 HIST2H2AA3Q6FI13 130 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 RAET1GQ6H3X3 334 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 KDM7AQ6ZMT4 941 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 KRT222Q8N1A0 295 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CENPSQ8N2Z9 138 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TOP6BLQ8N6T0 577 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 B3GALNT2Q8NCR0 500 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 BRSK1Q8TDC3 778 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 LRRN4Q8WUT4 740 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 KLK6Q92876 244 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 NCLNQ969V3 563 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 MAGOHBQ96A72 148 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 INTS4Q96HW7 963 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ZBTB45Q96K62 511 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 FERD3LQ96RJ6 166 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 BTBD1Q9H0C5 482 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ARHGEF4Q9NR80 690 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 HOMER3Q9NSC5 361 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 GJB4Q9NTQ9 266 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 MARCH2Q9P0N8 246 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ATP6V1HQ9UI12 483 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 DNAJC12Q9UKB3 198 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 PPIEQ9UNP9 301 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 MORC2Q9Y6X9 1032 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 A0A0U1RQF3 1178 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 APOL1O14791 398 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 KRT33AO76009 404 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 C22orf31O95567 290 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 EGFP01133 1207 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 STIP1P31948 543 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CHRNA3P32297 505 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 IRS1P35568 1242 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ANTXR2P58335 489 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF445P59923 1031 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SLMAPQ14BN4 828 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SEC23AQ15436 765 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 HIF1AQ16665 826 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 KRT71Q3SY84 523 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 C8orf34Q49A92 452 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 NAPEPLDQ6IQ20 393 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CYB5D1Q6P9G0 228 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 USP45Q70EL2 814 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ENOSF1Q7L5Y1 443 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SMYD4Q8IYR2 804 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 PDIK1LQ8N165 341 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ALLCQ8N6M5 410 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF614Q8N883 585 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TXNDC5Q8NBS9 432 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ARMC2Q8NEN0 867 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 OR8K1Q8NGG5 319 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TPCN2Q8NHX9 752 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 MAPK15Q8TD08 544 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TRPC4APQ8TEL6 797 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 REXO5Q96IC2 774 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SERPINB11Q96P15 392 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 MRPL45Q9BRJ2 306 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 EDEM2Q9BV94 578 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 RUBCNLQ9H714 662 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 PARVAQ9NVD7 372 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ALKBH4Q9NXW9 302 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CACNG4Q9UBN1 327 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TRIM10Q9UDY6 481 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 VPS51Q9UID3 782 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 YIPF1Q9Y548 306 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 PCDHGA4Q9Y5G9 962 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 WNT6Q9Y6F9 365 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 LEFTY2O00292 366 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ZBTB39O15060 712 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 BMP10O95393 424 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 MAPTP10636 758 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 PDGFRAP16234 1089 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CXCR2P25025 360 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 FNTAP49354 379 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 NDUFA8P51970 172 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 MOGSQ13724 837 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 RBBP7Q16576 425 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 AARS2Q5JTZ9 985 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SPDYAQ5MJ70 313 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TTC39BQ5VTQ0 682 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ATG16L1Q676U5 607 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TSSK4Q6SA08 328 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CMTM8Q8IZV2 173 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SPPL2BQ8TCT7 592 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 MCOLN3Q8TDD5 553 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 NXPE3Q969Y0 559 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 RUNDC3BQ96NL0 473 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 GUCD1Q96NT3 240 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SLC38A3Q99624 504 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 OSBPL10Q9BXB5 764 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 MRPL46Q9H2W6 279 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 BFARQ9NZS9 450 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ADAM22Q9P0K1 906 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms