RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 SDCBP2Q9H190 292 aa12.96□□□□□ -0.33
DDR1-262ENST00000508312 TPK1Q9H3S4 243 aa12.96□□□□□ -0.33
DDR1-262ENST00000508312 CXorf21Q9HAI6 301 aa12.96□□□□□ -0.33
DDR1-262ENST00000508312 CLK4Q9HAZ1 481 aaKnown RBP12.96□□□□□ -0.33
DDR1-262ENST00000508312 ACSS2Q9NR19 701 aa12.96□□□□□ -0.33
DDR1-262ENST00000508312 PNPLA3Q9NST1 481 aa12.96□□□□□ -0.33
DDR1-262ENST00000508312 C20orf96Q9NUD7 363 aaPredicted RBP12.96□□□□□ -0.33
DDR1-262ENST00000508312 DAPK2Q9UIK4 370 aa12.96□□□□□ -0.33
DDR1-262ENST00000508312 GIT1Q9Y2X7 761 aa12.96□□□□□ -0.33
DDR1-262ENST00000508312 A8MU76 341 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 PLOD2O00469 737 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 MSCO60682 206 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 AMHP03971 560 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 S100A1P23297 94 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 NAMPTP43490 491 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 USP41Q3LFD5 358 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 MGAT5BQ3V5L5 792 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 PERM1Q5SV97 790 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 LDLRAP1Q5SW96 308 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 SLC9A4Q6AI14 798 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 C16orf89Q6UX73 402 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 ARCQ7LC44 396 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 ADGRF2Q8IZF7 708 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.96□□□□□ -0.34
DDR1-262ENST00000508312 SMYD2Q9NRG4 433 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 GIN1Q9NXP7 522 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 TTLL3Q9Y4R7 772 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 TEX264Q9Y6I9 313 aa12.96□□□□□ -0.34
DDR1-262ENST00000508312 HTTP42858 3142 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 HSPA4LO95757 839 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 S100BP04271 92 aaPredicted RBP12.95□□□□□ -0.34
DDR1-262ENST00000508312 BMXP51813 675 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 CTBSQ01459 385 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 ZBTB17Q13105 803 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 AARS2Q5JTZ9 985 aaKnown RBP12.95□□□□□ -0.34
DDR1-262ENST00000508312 TMEM26Q6ZUK4 368 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 ENOSF1Q7L5Y1 443 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 C14orf80Q86SX3 495 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 UBR7Q8N806 425 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 TMEM35BQ8NCS4 154 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 LRTOMTQ8WZ04 291 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 SPATA33Q96N06 139 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 KLHL32Q96NJ5 620 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 PGLYRP2Q96PD5 576 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 RTKNQ9BST9 563 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 CCDC68Q9H2F9 335 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 HIPK3Q9H422 1215 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 SLC17A6Q9P2U8 582 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 MRPL42Q9Y6G3 142 aaKnown RBP12.95□□□□□ -0.34
DDR1-262ENST00000508312 LRCH4O75427 683 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 ITGB3P05106 788 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 ZNF286BP0CG31 522 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 HMGB2P26583 209 aaKnown RBP12.95□□□□□ -0.34
DDR1-262ENST00000508312 L1CAMP32004 1257 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 GHRHRQ02643 423 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 NEDD8Q15843 81 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 INAQ16352 499 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 MBLAC2Q68D91 279 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 RWDD4Q6NW29 188 aaKnown RBP12.95□□□□□ -0.34
DDR1-262ENST00000508312 CASC4Q6P4E1 433 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 MARK4Q96L34 752 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 COG4Q9H9E3 785 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 VPS45Q9NRW7 570 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 ATAD3AQ9NVI7 634 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 HOXC10Q9NYD6 342 aa12.95□□□□□ -0.34
DDR1-262ENST00000508312 USP2O75604 605 aaPredicted RBP12.94□□□□□ -0.34
DDR1-262ENST00000508312 ESRRBO95718 433 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 ASS1P00966 412 aaKnown RBP12.94□□□□□ -0.34
DDR1-262ENST00000508312 FGF3P11487 239 aaPredicted RBP12.94□□□□□ -0.34
DDR1-262ENST00000508312 ZNF182P17025 639 aaPredicted RBP12.94□□□□□ -0.34
DDR1-262ENST00000508312 ME2P23368 584 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 MAP4P27816 1152 aaKnown RBP12.94□□□□□ -0.34
DDR1-262ENST00000508312 CRHR1P34998 444 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 BAG6P46379 1132 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 CEACAM7Q14002 265 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 SLC9B1Q4ZJI4 515 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 MTX3Q5HYI7 312 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 UTS2BQ765I0 119 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 FIBCD1Q8N539 461 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 TBC1D15Q8TC07 691 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 DCPSQ96C86 337 aaKnown RBP12.94□□□□□ -0.34
DDR1-262ENST00000508312 NAA50Q9GZZ1 169 aaKnown RBP12.94□□□□□ -0.34
DDR1-262ENST00000508312 WDR55Q9H6Y2 383 aaPredicted RBP12.94□□□□□ -0.34
DDR1-262ENST00000508312 OLAHQ9NV23 265 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 GPRC5DQ9NZD1 345 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 HESX1Q9UBX0 185 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 HES2Q9Y543 173 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 ADGRA2Q96PE1 1338 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 MYO18AQ92614 2054 aaKnown RBP12.94□□□□□ -0.34
DDR1-262ENST00000508312 SPAG6O75602 509 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 BAIAP3O94812 1187 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 SERPINE1P05121 402 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 CYP2C8P10632 490 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 CKMT2P17540 419 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 OSBPP22059 807 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 JAK1P23458 1154 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 IREB2P48200 963 aaKnown RBP12.94□□□□□ -0.34
DDR1-262ENST00000508312 ZBED5Q49AG3 693 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 GLRA4Q5JXX5 417 aa12.94□□□□□ -0.34
DDR1-262ENST00000508312 GALNT18Q6P9A2 607 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms