RNA–Protein interactions for RNA: ENST00000507232.5

SPDL1-206, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 1 (best)

Gene SPDL1, Length 2,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-206ENST00000507232 RAB41Q5JT25 222 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 NAPRTQ6XQN6 538 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 KCNMB4Q86W47 210 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 SPATA6LQ8N4H0 392 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 ENDOVQ8N8Q3 282 aaKnown RBP13.25□□□□□ -0.29
SPDL1-206ENST00000507232 OR10T2Q8NGX3 314 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 PIWIL2Q8TC59 973 aaKnown RBP13.25□□□□□ -0.29
SPDL1-206ENST00000507232 APBB2Q92870 758 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 SMARCD1Q96GM5 515 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 RBBP8Q99708 897 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 ATXN3LQ9H3M9 355 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 NDFIP2Q9NV92 336 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 SLC38A7Q9NVC3 462 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 COPG2Q9UBF2 871 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 TAGLN3Q9UI15 199 aa13.25□□□□□ -0.29
SPDL1-206ENST00000507232 G3BP2Q9UN86 482 aaKnown RBP13.25□□□□□ -0.29
SPDL1-206ENST00000507232 A0A096LPK6 155 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 PSMG1O95456 288 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 CPA3P15088 417 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 CD1EP15812 388 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 NCF2P19878 526 aaPredicted RBP13.24□□□□□ -0.29
SPDL1-206ENST00000507232 ABL2P42684 1182 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 GLRBP48167 497 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 TUBB3Q13509 450 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 EML3Q32P44 896 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 SDHAF4Q5VUM1 108 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 PDZD4Q76G19 769 aaPredicted RBP13.24□□□□□ -0.29
SPDL1-206ENST00000507232 WDR75Q8IWA0 830 aaKnown RBP13.24□□□□□ -0.29
SPDL1-206ENST00000507232 PNPLA1Q8N8W4 532 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 ZNF419Q96HQ0 510 aaPredicted RBP13.24□□□□□ -0.29
SPDL1-206ENST00000507232 NAF1Q96HR8 494 aaKnown RBP13.24□□□□□ -0.29
SPDL1-206ENST00000507232 APBA2Q99767 749 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 ARHGAP39Q9C0H5 1083 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 GBA3Q9H227 469 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 YY1AP1Q9H869 796 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 CASS4Q9NQ75 786 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 CDH9Q9ULB4 789 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 SLC39A10Q9ULF5 831 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 HTTP42858 3142 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 PHGDHO43175 533 aaKnown RBP13.24□□□□□ -0.29
SPDL1-206ENST00000507232 RGS2P41220 211 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 IDH3AP50213 366 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 CACNB2Q08289 660 aaPredicted RBP13.24□□□□□ -0.29
SPDL1-206ENST00000507232 ZNF460Q14592 562 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 POU6F1Q14863 301 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 RALGPS1Q5JS13 557 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 GRTP1Q5TC63 336 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 KCTD11Q693B1 232 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 RAPH1Q70E73 1250 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 CYS1Q717R9 158 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 CNTD1Q8N815 330 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 IPMKQ8NFU5 416 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 DQX1Q8TE96 717 aaKnown RBP13.24□□□□□ -0.29
SPDL1-206ENST00000507232 STMN2Q93045 179 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 NTAN1Q96AB6 310 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 EPAS1Q99814 870 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 CPNE1Q99829 537 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 DCLRE1BQ9H816 532 aa13.24□□□□□ -0.29
SPDL1-206ENST00000507232 TTC3P53804 2025 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 SF3B1O75533 1304 aaKnown RBP eCLIP13.23□□□□□ -0.293e-6■■■■■ 137.9
SPDL1-206ENST00000507232 LOC100653049A0A140TA62 436 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 TBX10O75333 385 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 KRT34O76011 436 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 SERPINE1P05121 402 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 CXCR3P49682 368 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 ABCE1P61221 599 aaKnown RBP13.23□□□□□ -0.29
SPDL1-206ENST00000507232 GALNT2Q10471 571 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 SCAPQ12770 1279 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 GRM3Q14832 879 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 MUM1Q2TAK8 710 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 TAF2Q6P1X5 1199 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 CCNJLQ8IV13 435 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 TMEM86AQ8N2M4 240 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 ZNF781Q8N8C0 355 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 ACMSDQ8TDX5 336 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 PPP4R1Q8TF05 950 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 SLC9A7Q96T83 725 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 SENP6Q9GZR1 1112 aaPredicted RBP13.23□□□□□ -0.29
SPDL1-206ENST00000507232 CYP4F11Q9HBI6 524 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 NMRK1Q9NWW6 199 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 TRPM7Q96QT4 1865 aa13.23□□□□□ -0.29
SPDL1-206ENST00000507232 GOLGA8QA0A0J9YX86 632 aa13.22□□□□□ -0.29
SPDL1-206ENST00000507232 GOLGA8OA6NCC3 632 aa13.22□□□□□ -0.29
SPDL1-206ENST00000507232 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.22□□□□□ -0.29
SPDL1-206ENST00000507232 GOLGA8NF8WBI6 632 aa13.22□□□□□ -0.29
SPDL1-206ENST00000507232 SERPINA6P08185 405 aa13.22□□□□□ -0.29
SPDL1-206ENST00000507232 AKR1A1P14550 325 aa13.22□□□□□ -0.29
SPDL1-206ENST00000507232 HOXC8P31273 242 aa13.22□□□□□ -0.29
SPDL1-206ENST00000507232 SPRP35270 261 aaPredicted RBP13.22□□□□□ -0.29
SPDL1-206ENST00000507232 LIMK2P53671 638 aa13.22□□□□□ -0.29
SPDL1-206ENST00000507232 ITGA7Q13683 1181 aa13.22□□□□□ -0.29
SPDL1-206ENST00000507232 NOMO2Q5JPE7 1267 aa13.22□□□□□ -0.29
SPDL1-206ENST00000507232 TMEM135Q86UB9 458 aa13.22□□□□□ -0.29
SPDL1-206ENST00000507232 TMPRSS6Q8IU80 811 aa13.22□□□□□ -0.29
SPDL1-206ENST00000507232 SCUBE1Q8IWY4 988 aa13.22□□□□□ -0.29
SPDL1-206ENST00000507232 ULK2Q8IYT8 1036 aa13.22□□□□□ -0.29
SPDL1-206ENST00000507232 CFAP61Q8NHU2 1237 aa13.22□□□□□ -0.29
SPDL1-206ENST00000507232 RAB3IL1Q8TBN0 382 aa13.22□□□□□ -0.29
SPDL1-206ENST00000507232 URGCPQ8TCY9 931 aa13.22□□□□□ -0.29
SPDL1-206ENST00000507232 HDAC11Q96DB2 347 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms