RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 PMPCAQ10713 525 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 PKP1Q13835 747 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 GALNT3Q14435 633 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 INPP5JQ15735 1006 aaPredicted RBP3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 PDCD2Q16342 344 aaPredicted RBP3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 TBRG1Q3YBR2 411 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 FBXO43Q4G163 708 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 SH2D4BQ5SQS7 431 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 UBAP2Q5T6F2 1119 aaKnown RBP3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 LRIG3Q6UXM1 1119 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 CYB5R4Q7L1T6 521 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 MRPL10Q7Z7H8 261 aaKnown RBP3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 CCDC25Q86WR0 208 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 HERC6Q8IVU3 1022 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 PTGR2Q8N8N7 351 aaPredicted RBP3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 ADPRHL1Q8NDY3 354 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 CMASQ8NFW8 434 aaPredicted RBP3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 TMEM174Q8WUU8 243 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 HMCESQ96FZ2 354 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 LTV1Q96GA3 475 aaPredicted RBP3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 PIGSQ96S52 555 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 TRIM31Q9BZY9 425 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 CTDSP1Q9GZU7 261 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 TWSG1Q9GZX9 223 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 MAP6D1Q9H9H5 199 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 ERVK-5Q9HDB9 667 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 THAP1Q9NVV9 213 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 KIF17Q9P2E2 1029 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 TNFSF13BQ9Y275 285 aa3.8□□□□□ -1.8
CDC42SE2-210ENST00000506929 TARSL2A2RTX5 802 aaKnown RBP3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 DPPA5A6NC42 116 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 H3BNX3 289 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 IFRD1O00458 451 aaPredicted RBP3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 SYN3O14994 580 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 NTN1O95631 604 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 ITGB6P18564 788 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 RFX5P48382 616 aaPredicted RBP3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 PCP4P48539 62 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 LAMB3Q13751 1172 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 DLGAP5Q15398 846 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 NAPEPLDQ6IQ20 393 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 RFX8Q6ZV50 586 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 CTU1Q7Z7A3 348 aaKnown RBP3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 TRIM74Q86UV6 250 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 TRIM73Q86UV7 250 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 KLBQ86Z14 1044 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 TMEM199Q8N511 208 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 ENDOVQ8N8Q3 282 aaKnown RBP3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 RBM17Q96I25 401 aaKnown RBP3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 COG8Q96MW5 612 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 WDR83Q9BRX9 315 aaKnown RBP3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 UPB1Q9UBR1 384 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 SLC25A13Q9UJS0 675 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 BAG5Q9UL15 447 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 SQORQ9Y6N5 450 aa3.79□□□□□ -1.8
CDC42SE2-210ENST00000506929 TRBV5-7A0A0A0MS05 114 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 IGLV5-39A0A0G2JS06 123 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 PRPF4O43172 522 aaKnown RBP eCLIP3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 FCGR2AP12318 317 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 HOXB2P14652 356 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 HOXB9P17482 250 aaPredicted RBP3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 HOXA11P31270 313 aaPredicted RBP3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 AARSP49588 968 aaKnown RBP eCLIP3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 MVDP53602 400 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 PPATQ06203 517 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 MAPK7Q13164 816 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 ALKBH1Q13686 389 aaKnown RBP3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 AP5B1Q2VPB7 878 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 PRTGQ2VWP7 1150 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 GXYLT1Q4G148 440 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 MANEAQ5SRI9 462 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 BRSK2Q8IWQ3 736 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 PELI3Q8N2H9 469 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 ANKRD42Q8N9B4 389 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 FSIP1Q8NA03 581 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 C9orf106Q8NAJ2 232 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 CEP70Q8NHQ1 597 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 THAP4Q8WY91 577 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 POLDIP3Q9BY77 421 aaKnown RBP3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 HIPK3Q9H422 1215 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 SAYSD1Q9NPB0 183 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 POT1Q9NUX5 634 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 NLKQ9UBE8 527 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 ANAPC4Q9UJX5 808 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 DNAJC16Q9Y2G8 782 aa3.78□□□□□ -1.8
CDC42SE2-210ENST00000506929 PROB1E7EW31 1015 aa3.77□□□□□ -1.81
CDC42SE2-210ENST00000506929 H0YGN5 161 aa3.77□□□□□ -1.81
CDC42SE2-210ENST00000506929 USP12O75317 370 aa3.77□□□□□ -1.81
CDC42SE2-210ENST00000506929 TOMM40O96008 361 aa3.77□□□□□ -1.81
CDC42SE2-210ENST00000506929 TFRCP02786 760 aaKnown RBP3.77□□□□□ -1.81
CDC42SE2-210ENST00000506929 TK1P04183 234 aa3.77□□□□□ -1.81
CDC42SE2-210ENST00000506929 TMEM191BP0C7N4 346 aa3.77□□□□□ -1.81
CDC42SE2-210ENST00000506929 CKMT1AP12532 417 aa3.77□□□□□ -1.81
CDC42SE2-210ENST00000506929 TNFSF8P32971 234 aa3.77□□□□□ -1.81
CDC42SE2-210ENST00000506929 CCT4P50991 539 aaKnown RBP3.77□□□□□ -1.81
CDC42SE2-210ENST00000506929 TRAF1Q13077 416 aa3.77□□□□□ -1.81
CDC42SE2-210ENST00000506929 PTGR1Q14914 329 aa3.77□□□□□ -1.81
CDC42SE2-210ENST00000506929 GPR162Q16538 588 aa3.77□□□□□ -1.81
CDC42SE2-210ENST00000506929 INO80DQ53TQ3 878 aaPredicted RBP3.77□□□□□ -1.81
CDC42SE2-210ENST00000506929 ISM2Q6H9L7 571 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms