RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 LMAN2LQ9H0V9 348 aa3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 SLC25A18Q9H1K4 315 aa3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 GHITMQ9H3K2 345 aa3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 SFXN1Q9H9B4 322 aa3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 EIF2B3Q9NR50 452 aaKnown RBP3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 TLR8Q9NR97 1041 aaKnown RBP3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 DUSP22Q9NRW4 184 aa3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 MTMR4Q9NYA4 1195 aa3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 TFCP2L1Q9NZI6 479 aa3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 KLQ9UEF7 1012 aa3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 CNOT11Q9UKZ1 510 aaKnown RBP3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 FZD4Q9ULV1 537 aa3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 OSGIN2Q9Y236 505 aa3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 PLA2R1Q13018 1463 aa3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 NCOA2Q15596 1464 aa3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 CCDC141Q6ZP82 1450 aa3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 PLEKHH2Q8IVE3 1493 aa3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 ZNF142P52746 1687 aaPredicted RBP3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 KIAA1107Q9UPP5 1409 aa3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 TNRQ92752 1358 aa3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.51□□□□□ -1.85
TRAPPC11-205ENST00000506426 KDM5DQ9BY66 1539 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 FNDC1Q4ZHG4 1894 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 MROH2AA6NES4 1674 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 A2ML1A8K2U0 1454 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 CCDC151A5D8V7 595 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 K7ESM1 405 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 AP3D1O14617 1153 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 ORC4O43929 436 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 CCNT1O60563 726 aaKnown RBP3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 PTP4A3O75365 173 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 URI1O94763 535 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 KAT7O95251 611 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 TTLL1O95922 423 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 MBPP02686 304 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 CLEC3BP05452 202 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 CYP4B1P13584 511 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 INSRRP14616 1297 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 ARSAP15289 507 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 PRPH2P23942 346 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 HSPA1LP34931 641 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 HNF1BP35680 557 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 HARS2P49590 506 aaKnown RBP3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 MVDP53602 400 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 COPB1P53618 953 aaKnown RBP3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 RARSP54136 660 aaKnown RBP3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 OAZ1P54368 228 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 EEFSECP57772 596 aaKnown RBP3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 PLP2Q04941 152 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 R3HDM1Q15032 1099 aaKnown RBP3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 TBCEQ15813 527 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 CNGA3Q16281 694 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 ZNF766Q5HY98 468 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 LY6G5CQ5SRR4 150 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 CFAP58Q5T655 872 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 SNX30Q5VWJ9 437 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 RPAP2Q8IXW5 612 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 LAS2Q8IYD9 372 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 ADSSL1Q8N142 457 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 LCORLQ8N3X6 602 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 METTL6Q8TCB7 284 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 NCSTNQ92542 709 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 AKAP1Q92667 903 aaKnown RBP eCLIP3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 ELP4Q96EB1 424 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 SAAL1Q96ER3 474 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 C5orf34Q96MH7 638 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 SERINC2Q96SA4 455 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 NPLQ9BXD5 320 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 FSD1LQ9BXM9 530 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 WDR11Q9BZH6 1224 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 TRIM31Q9BZY9 425 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 USP44Q9H0E7 712 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 TTC12Q9H892 705 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 SEMA4BQ9NPR2 832 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 SLC22A11Q9NSA0 550 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 NKIRAS2Q9NYR9 191 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 KCND2Q9NZV8 630 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 SLC25A13Q9UJS0 675 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 VPS28Q9UK41 221 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 ADAMTS5Q9UNA0 930 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 B3GNT3Q9Y2A9 372 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 PSAT1Q9Y617 370 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 PIAS3Q9Y6X2 628 aa3.5□□□□□ -1.85
TRAPPC11-205ENST00000506426 SPATA31A1Q5TZJ5 1347 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 KDM3AQ9Y4C1 1321 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 PZPP20742 1482 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 IQSEC2Q5JU85 1478 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 DNMT1P26358 1616 aaKnown RBP3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 NPIPB13A6NJU9 1138 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 NPIPB5A8MRT5 1133 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 TEX22C9J3V5 150 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 NPIPB4C9JG80 1138 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 H0YIZ8 118 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 GTPBP1O00178 669 aaKnown RBP3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 SYN3O14994 580 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 FYB1O15117 783 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 PDE8BO95263 885 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 CCNDBP1O95273 360 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 URODP06132 367 aa3.49□□□□□ -1.85
TRAPPC11-205ENST00000506426 LYL1P12980 280 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms