RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 SPATS2Q86XZ4 545 aaKnown RBP10.22□□□□□ -0.77
NEDD9-210ENST00000505589 ZC3H3Q8IXZ2 948 aaKnown RBP10.22□□□□□ -0.77
NEDD9-210ENST00000505589 SLC25A45Q8N413 288 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 AADATQ8N5Z0 425 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 ATP6V0D2Q8N8Y2 350 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 UBA3Q8TBC4 463 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 SLC35F5Q8WV83 523 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 ERCC4Q92889 916 aaPredicted RBP10.22□□□□□ -0.77
NEDD9-210ENST00000505589 TATDN2Q93075 761 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 FAM131CQ96AQ9 280 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 NAF1Q96HR8 494 aaKnown RBP10.22□□□□□ -0.77
NEDD9-210ENST00000505589 BTN2A3PQ96KV6 586 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 DYRK4Q9NR20 520 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 TMEM51Q9NW97 253 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 SERGEFQ9UGK8 458 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 SLCO3A1Q9UIG8 710 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 INTS6Q9UL03 887 aaKnown RBP10.22□□□□□ -0.77
NEDD9-210ENST00000505589 PCDHGA8Q9Y5G5 932 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 HS3ST3A1Q9Y663 406 aa10.22□□□□□ -0.77
NEDD9-210ENST00000505589 F5H5T6 163 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 TMX2-CTNND1H3BSU7 103 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 K7ENP7 123 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 MCF2LO15068 1137 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 SCAMP1O15126 338 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 MSI1O43347 362 aaKnown RBP10.21□□□□□ -0.77
NEDD9-210ENST00000505589 SLC28A2O43868 658 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 TCEA3O75764 348 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 MPOP05164 745 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 SLC6A4P31645 630 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 RPIAP49247 311 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 CLDN6P56747 220 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 RPS24P62847 133 aaKnown RBP10.21□□□□□ -0.77
NEDD9-210ENST00000505589 RABGAP1LQ5R372 815 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 TCERG1LQ5VWI1 586 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 INO80CQ6PI98 192 aaPredicted RBP10.21□□□□□ -0.77
NEDD9-210ENST00000505589 PCSK4Q6UW60 755 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 BHLHA9Q7RTU4 235 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 WFDC5Q8TCV5 224 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 MAPK15Q8TD08 544 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 NDRG1Q92597 394 aaKnown RBP10.21□□□□□ -0.77
NEDD9-210ENST00000505589 RPL10LQ96L21 214 aaKnown RBP10.21□□□□□ -0.77
NEDD9-210ENST00000505589 SLC46A1Q96NT5 459 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 MED15Q96RN5 788 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 GTPBP4Q9BZE4 634 aaKnown RBP10.21□□□□□ -0.77
NEDD9-210ENST00000505589 MTG2Q9H4K7 406 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 PPM1HQ9ULR3 514 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 COQ4Q9Y3A0 265 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 CSNK1G3Q9Y6M4 447 aa10.21□□□□□ -0.77
NEDD9-210ENST00000505589 PTPRQQ9UMZ3 2332 aa10.21□□□□□ -0.78
NEDD9-210ENST00000505589 O00370 1275 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 TRIM38O00635 465 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 WNT9AO14904 365 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 LZTS3O60299 673 aaPredicted RBP10.2□□□□□ -0.78
NEDD9-210ENST00000505589 SDC3O75056 442 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 CSO75390 466 aaKnown RBP10.2□□□□□ -0.78
NEDD9-210ENST00000505589 PIAS2O75928 621 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 GJB6O95452 261 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 NTRK1P04629 796 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 HSP90AA1P07900 732 aaKnown RBP10.2□□□□□ -0.78
NEDD9-210ENST00000505589 HNRNPA2B1P22626 353 aaKnown RBP10.2□□□□□ -0.78
NEDD9-210ENST00000505589 CMA1P23946 247 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 MAT2AP31153 395 aaKnown RBP10.2□□□□□ -0.78
NEDD9-210ENST00000505589 DRD3P35462 400 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 SGSHP51688 502 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 KRT83P78385 493 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 ACBD5Q5T8D3 534 aaPredicted RBP10.2□□□□□ -0.78
NEDD9-210ENST00000505589 ZCCHC8Q6NZY4 707 aaKnown RBP10.2□□□□□ -0.78
NEDD9-210ENST00000505589 TMC6Q7Z403 805 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 BTN2A2Q8WVV5 523 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 TTC9Q92623 222 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 SLC39A13Q96H72 371 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 PPP1R16AQ96I34 528 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 VCPIP1Q96JH7 1222 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 APOLD1Q96LR9 279 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 TSG101Q99816 390 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 CPNE5Q9HCH3 593 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 IPO11Q9UI26 975 aaKnown RBP10.2□□□□□ -0.78
NEDD9-210ENST00000505589 SALL4Q9UJQ4 1053 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 RCOR1Q9UKL0 485 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 SSUH2Q9Y2M2 353 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 KALRNO60229 2985 aa10.2□□□□□ -0.78
NEDD9-210ENST00000505589 MYLKQ15746 1914 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.19□□□□□ -0.78
NEDD9-210ENST00000505589 A0A1B0GVM2 712 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 TCAF2A6NFQ2 919 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 KCNU1A8MYU2 1149 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 TULP2O00295 520 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 TPP1O14773 563 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 ACTN4O43707 911 aaKnown RBP10.19□□□□□ -0.78
NEDD9-210ENST00000505589 ATP9BO43861 1147 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 PRNPP04156 253 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 SNX16P57768 344 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 FKBP3Q00688 224 aaKnown RBP10.19□□□□□ -0.78
NEDD9-210ENST00000505589 EIF3IQ13347 325 aaKnown RBP10.19□□□□□ -0.78
NEDD9-210ENST00000505589 ZNF177Q13360 481 aaPredicted RBP10.19□□□□□ -0.78
NEDD9-210ENST00000505589 LY6DQ14210 128 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 DLG2Q15700 870 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 ISXQ2M1V0 245 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 ARL13BQ3SXY8 428 aa10.19□□□□□ -0.78
NEDD9-210ENST00000505589 FSCBQ5H9T9 825 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms