RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 MDM4O15151 490 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 CLIC2O15247 247 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 MID1O15344 667 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 NVLO15381 856 aaKnown RBP6.23□□□□□ -1.41
GYPB-204ENST00000504951 PLRG1O43660 514 aaKnown RBP6.23□□□□□ -1.41
GYPB-204ENST00000504951 SIN3BO75182 1162 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 DLATP10515 647 aaKnown RBP6.23□□□□□ -1.41
GYPB-204ENST00000504951 CASRP41180 1078 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 AFMP43652 599 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 CD97P48960 835 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 CASP4P49662 377 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 CYP2J2P51589 502 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 MCCD1P59942 119 aaPredicted RBP6.23□□□□□ -1.41
GYPB-204ENST00000504951 ST8SIA6P61647 398 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 TLE1Q04724 770 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 EHHADHQ08426 723 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 ELAVL3Q14576 367 aaKnown RBP6.23□□□□□ -1.41
GYPB-204ENST00000504951 AGERQ15109 404 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 SETMARQ53H47 684 aaPredicted RBP6.23□□□□□ -1.41
GYPB-204ENST00000504951 PIK3R6Q5UE93 754 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 ZCCHC8Q6NZY4 707 aaKnown RBP6.23□□□□□ -1.41
GYPB-204ENST00000504951 RBM44Q6ZP01 1051 aaKnown RBP6.23□□□□□ -1.41
GYPB-204ENST00000504951 USP53Q70EK8 1073 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 GPRIN1Q7Z2K8 1008 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 ACOT1Q86TX2 421 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 NELFCDQ8IXH7 590 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 LINC00528Q8N1L1 170 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 SCML4Q8N228 414 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 AADATQ8N5Z0 425 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 ARMC2Q8NEN0 867 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 CYB5D2Q8WUJ1 264 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 BHMTQ93088 406 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 ITPKCQ96DU7 683 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 CYFIP2Q96F07 1278 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 KLHDC7BQ96G42 594 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 MRGPRX3Q96LB0 322 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 TBATAQ96M53 351 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 DUSP16Q9BY84 665 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 TRIM4Q9C037 500 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 DNAI2Q9GZS0 605 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 SDCBP2Q9H190 292 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 CYP3A43Q9HB55 503 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 PREBQ9HCU5 417 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 AGPAT3Q9NRZ7 376 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 ABCB8Q9NUT2 735 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 KBTBD4Q9NVX7 518 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 TFIP11Q9UBB9 837 aaKnown RBP6.23□□□□□ -1.41
GYPB-204ENST00000504951 ANAPC2Q9UJX6 822 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 HS3ST3A1Q9Y663 406 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 COL27A1Q8IZC6 1860 aaPredicted RBP6.23□□□□□ -1.41
GYPB-204ENST00000504951 NBASA2RRP1 2371 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 TBC1D3DA0A087WVF3 549 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 TBC1D3IA0A087WXS9 549 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 TBC1D3EA0A087X179 549 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 TBC1D3KA0A087X1G2 549 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 TBC1D3FA6NER0 549 aaPredicted RBP6.22□□□□□ -1.41
GYPB-204ENST00000504951 TBC1D3LB9A6J9 549 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 K7ESM1 405 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 NTN3O00634 580 aaPredicted RBP6.22□□□□□ -1.41
GYPB-204ENST00000504951 IKBKBO14920 756 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 RNASEH2AO75792 299 aaKnown RBP6.22□□□□□ -1.41
GYPB-204ENST00000504951 ASS1P00966 412 aaKnown RBP6.22□□□□□ -1.41
GYPB-204ENST00000504951 IGLV3-27P01718 113 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 TBC1D3HP0C7X1 549 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 THEGLP0DJG4 465 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 CCDC130P13994 396 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 TGM2P21980 687 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 CD82P27701 267 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 DRD3P35462 400 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 TXLNAP40222 546 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 NASPP49321 788 aaPredicted RBP6.22□□□□□ -1.41
GYPB-204ENST00000504951 NDST1P52848 882 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 RIPPLY3P57055 190 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 HNRNPKP61978 463 aaKnown RBP eCLIP6.22□□□□□ -1.41
GYPB-204ENST00000504951 ENPEPQ07075 957 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 CCDC15Q0P6D6 951 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 EFEMP1Q12805 493 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 SLC12A1Q13621 1099 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 TBR1Q16650 682 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 ZNF699Q32M78 642 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 TBC1D3GQ6DHY5 549 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 TBC1D3CQ6IPX1 549 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 SHC4Q6S5L8 630 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 ABI3BPQ7Z7G0 1075 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 C14orf80Q86SX3 495 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 ZSCAN30Q86W11 494 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 DTX1Q86Y01 620 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 MMAAQ8IVH4 418 aaKnown RBP6.22□□□□□ -1.41
GYPB-204ENST00000504951 CCDC65Q8IXS2 484 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 TBC1D3Q8IZP1 549 aaPredicted RBP6.22□□□□□ -1.41
GYPB-204ENST00000504951 TMEM151AQ8N4L1 468 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 TTC39CQ8N584 583 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 MEIOBQ8N635 442 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 ZNF366Q8N895 744 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 C12orf29Q8N999 325 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 XXYLT1Q8NBI6 393 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 LINC00301Q8NCQ3 95 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 OR14C36Q8NHC7 312 aa6.22□□□□□ -1.41
GYPB-204ENST00000504951 ZNF564Q8TBZ8 553 aaPredicted RBP6.22□□□□□ -1.41
GYPB-204ENST00000504951 IFI44Q8TCB0 444 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms