RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 KRT39Q6A163 491 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 USP30Q70CQ3 517 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 KIAA0907Q7Z7F0 614 aaPredicted RBP9.39□□□□□ -0.91
DHFR-202ENST00000504396 ZC3H3Q8IXZ2 948 aaKnown RBP9.39□□□□□ -0.91
DHFR-202ENST00000504396 CARNMT1Q8N4J0 409 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 SVOPQ8N4V2 548 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 ANKRD52Q8NB46 1076 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 SLC4A11Q8NBS3 891 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 OR14C36Q8NHC7 312 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 SERAC1Q96JX3 654 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 RSPH9Q9H1X1 276 aaPredicted RBP9.39□□□□□ -0.91
DHFR-202ENST00000504396 TMEM8AQ9HCN3 771 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 TSPAN16Q9UKR8 245 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 NYNRINQ9P2P1 1898 aaKnown RBP9.39□□□□□ -0.91
DHFR-202ENST00000504396 GOLGA6L7A0A1B0GV03 622 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 YJEFN3A6XGL0 299 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 E7ENQ6 273 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 PIK3R2O00459 728 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 XPO1O14980 1071 aaKnown RBP9.39□□□□□ -0.91
DHFR-202ENST00000504396 BRINP1O60477 761 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 STX10O60499 249 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 WNT1P04628 370 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 HSP90AA1P07900 732 aaKnown RBP9.39□□□□□ -0.91
DHFR-202ENST00000504396 C1SP09871 688 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 PLA2G2AP14555 144 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 EPHA8P29322 1005 aaPredicted RBP9.39□□□□□ -0.91
DHFR-202ENST00000504396 PSMC2P35998 433 aaKnown RBP9.39□□□□□ -0.91
DHFR-202ENST00000504396 CSKP41240 450 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 NUMBP49757 651 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 BST2Q10589 180 aaKnown RBP9.39□□□□□ -0.91
DHFR-202ENST00000504396 TAF1BQ53T94 588 aaPredicted RBP9.39□□□□□ -0.91
DHFR-202ENST00000504396 SGO2Q562F6 1265 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 DCAF17Q5H9S7 520 aaPredicted RBP9.39□□□□□ -0.91
DHFR-202ENST00000504396 TCERG1LQ5VWI1 586 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 NUGGCQ68CJ6 796 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 GPR155Q7Z3F1 870 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 SCML4Q8N228 414 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 HJURPQ8NCD3 748 aaPredicted RBP9.39□□□□□ -0.91
DHFR-202ENST00000504396 FBXL13Q8NEE6 735 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 OR2T34Q8NGX1 318 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 UBA3Q8TBC4 463 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 SAP25Q8TEE9 199 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 SEMA4DQ92854 862 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 NAF1Q96HR8 494 aaKnown RBP9.39□□□□□ -0.91
DHFR-202ENST00000504396 CALR3Q96L12 384 aaKnown RBP9.39□□□□□ -0.91
DHFR-202ENST00000504396 LGMNQ99538 433 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 ORAI3Q9BRQ5 295 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 NEUROG2Q9H2A3 272 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 PRORYQ9H606 182 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 ABCC13Q9NSE7 274 aa9.39□□□□□ -0.91
DHFR-202ENST00000504396 KNTC1P50748 2209 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 SMG1Q96Q15 3661 aaKnown RBP9.38□□□□□ -0.91
DHFR-202ENST00000504396 BPTFQ12830 3046 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 TBC1D3DA0A087WVF3 549 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 TBC1D3IA0A087WXS9 549 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 TBC1D3EA0A087X179 549 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 TBC1D3KA0A087X1G2 549 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 TBC1D3FA6NER0 549 aaPredicted RBP9.38□□□□□ -0.91
DHFR-202ENST00000504396 TBC1D3LB9A6J9 549 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 CDK2AP1O14519 115 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 IRAK2O43187 625 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 SDC3O75056 442 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 RHOBTB3O94955 611 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 MOCS3O95396 460 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 MOCS2O96007 188 aaPredicted RBP9.38□□□□□ -0.91
DHFR-202ENST00000504396 ASLP04424 464 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 TBC1D3HP0C7X1 549 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 ZSCAN22P10073 491 aaPredicted RBP9.38□□□□□ -0.91
DHFR-202ENST00000504396 GLDCP23378 1020 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 SLC6A4P31645 630 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 SLC8A1P32418 973 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 ACTN2P35609 894 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 RGS7P49802 495 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 DAB2P98082 770 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 ADAM9Q13443 819 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 HNRNPA1L2Q32P51 320 aaKnown RBP9.38□□□□□ -0.91
DHFR-202ENST00000504396 HS1BP3Q53T59 392 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 PIK3R6Q5UE93 754 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 TBC1D3GQ6DHY5 549 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 TBC1D3CQ6IPX1 549 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 KDM7AQ6ZMT4 941 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 SND1Q7KZF4 910 aaKnown RBP eCLIP9.38□□□□□ -0.91
DHFR-202ENST00000504396 UNC45BQ8IWX7 931 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 TBC1D3Q8IZP1 549 aaPredicted RBP9.38□□□□□ -0.91
DHFR-202ENST00000504396 ZNF295-AS1Q8N0V1 137 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 GUF1Q8N442 669 aaKnown RBP9.38□□□□□ -0.91
DHFR-202ENST00000504396 KDM1BQ8NB78 822 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 TPCN2Q8NHX9 752 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 FGF11Q92914 225 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 EEF2KMTQ96G04 330 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 NRSN2Q9GZP1 204 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 EBF2Q9HAK2 575 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 RAB20Q9NX57 234 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 FZD4Q9ULV1 537 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 CLCA2Q9UQC9 943 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 MYLKQ15746 1914 aa9.38□□□□□ -0.91
DHFR-202ENST00000504396 EDDM13A0A1B0GTR0 161 aa9.37□□□□□ -0.91
DHFR-202ENST00000504396 TEX51A0A1B0GUA7 166 aa9.37□□□□□ -0.91
DHFR-202ENST00000504396 A0A1B0GVL5 298 aa9.37□□□□□ -0.91
DHFR-202ENST00000504396 TTC34A8MYJ7 566 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms