RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 KIF19Q2TAC6 998 aa22.67■■□□□ 1.22
LSM6-203ENST00000503982 DPY19L2P1Q6NXN4 242 aa22.67■■□□□ 1.22
LSM6-203ENST00000503982 DSG4Q86SJ6 1040 aa22.67■■□□□ 1.22
LSM6-203ENST00000503982 XYLT1Q86Y38 959 aa22.67■■□□□ 1.22
LSM6-203ENST00000503982 SPAG5Q96R06 1193 aa22.67■■□□□ 1.22
LSM6-203ENST00000503982 FAM129BQ96TA1 746 aa22.67■■□□□ 1.22
LSM6-203ENST00000503982 BPIFA3Q9BQP9 254 aa22.67■■□□□ 1.22
LSM6-203ENST00000503982 NAA15Q9BXJ9 866 aaKnown RBP22.67■■□□□ 1.22
LSM6-203ENST00000503982 NLRC4Q9NPP4 1024 aa22.67■■□□□ 1.22
LSM6-203ENST00000503982 AASDHPPTQ9NRN7 309 aa22.67■■□□□ 1.22
LSM6-203ENST00000503982 FAM207AQ9NSI2 230 aaPredicted RBP22.67■■□□□ 1.22
LSM6-203ENST00000503982 EPG5Q9HCE0 2579 aa22.67■■□□□ 1.22
LSM6-203ENST00000503982 LSM8O95777 96 aaKnown RBP22.66■■□□□ 1.22
LSM6-203ENST00000503982 GOT1P17174 413 aa22.66■■□□□ 1.22
LSM6-203ENST00000503982 C5AR1P21730 350 aa22.66■■□□□ 1.22
LSM6-203ENST00000503982 CDH5P33151 784 aaPredicted RBP22.66■■□□□ 1.22
LSM6-203ENST00000503982 GABRB2P47870 512 aa22.66■■□□□ 1.22
LSM6-203ENST00000503982 KLK7P49862 253 aa22.66■■□□□ 1.22
LSM6-203ENST00000503982 PLK1P53350 603 aa22.66■■□□□ 1.22
LSM6-203ENST00000503982 KRT83P78385 493 aa22.66■■□□□ 1.22
LSM6-203ENST00000503982 ELAVL3Q14576 367 aaKnown RBP22.66■■□□□ 1.22
LSM6-203ENST00000503982 ZNF423Q2M1K9 1284 aa22.66■■□□□ 1.22
LSM6-203ENST00000503982 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.66■■□□□ 1.22
LSM6-203ENST00000503982 CHCHD4Q8N4Q1 142 aa22.66■■□□□ 1.22
LSM6-203ENST00000503982 OR2T34Q8NGX1 318 aa22.66■■□□□ 1.22
LSM6-203ENST00000503982 C1orf216Q8TAB5 229 aa22.66■■□□□ 1.22
LSM6-203ENST00000503982 SKA1Q96BD8 255 aa22.66■■□□□ 1.22
LSM6-203ENST00000503982 ACE2Q9BYF1 805 aaPredicted RBP22.66■■□□□ 1.22
LSM6-203ENST00000503982 ARHGEF38Q9NXL2 777 aa22.66■■□□□ 1.22
LSM6-203ENST00000503982 FZD4Q9ULV1 537 aa22.66■■□□□ 1.22
LSM6-203ENST00000503982 TBC1D3DA0A087WVF3 549 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 TBC1D3IA0A087WXS9 549 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 TBC1D3EA0A087X179 549 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 TBC1D3KA0A087X1G2 549 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 TBC1D3FA6NER0 549 aaPredicted RBP22.65■■□□□ 1.22
LSM6-203ENST00000503982 GOLGA8CPA6NN73 597 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 TBC1D3LB9A6J9 549 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 C1QTNF3-AMACRE9PGA6 284 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 KCNK3O14649 394 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 CNTN5O94779 1100 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 PROS1P07225 676 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 TBC1D3HP0C7X1 549 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 CXCR3P49682 368 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 DLG2Q15700 870 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 SLC25A52Q3SY17 297 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 OTUD1Q5VV17 481 aaPredicted RBP22.65■■□□□ 1.22
LSM6-203ENST00000503982 TBC1D3GQ6DHY5 549 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 TBC1D3CQ6IPX1 549 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 TBC1D3Q8IZP1 549 aaPredicted RBP22.65■■□□□ 1.22
LSM6-203ENST00000503982 EPS8L1Q8TE68 723 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 RHBDD1Q8TEB9 315 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 SLC6A18Q96N87 628 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 FEM1AQ9BSK4 669 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 OSGEPQ9NPF4 335 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 METTL5Q9NRN9 209 aaKnown RBP22.65■■□□□ 1.22
LSM6-203ENST00000503982 FANCLQ9NW38 375 aa22.65■■□□□ 1.22
LSM6-203ENST00000503982 APOBEC2Q9Y235 224 aaKnown RBP22.65■■□□□ 1.22
LSM6-203ENST00000503982 FARP1Q9Y4F1 1045 aaPredicted RBP22.65■■□□□ 1.22
LSM6-203ENST00000503982 A0A1W2PPC4 97 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 SRGAP2O75044 1071 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 IGHV4-34P06331 123 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 FTH1P19P0C7X4 201 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 ZNF883P0CG24 379 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 C7P10643 843 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 CDK11BP21127 795 aaKnown RBP22.64■■□□□ 1.21
LSM6-203ENST00000503982 SCNN1AP37088 669 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 CCT8P50990 548 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 NOMO3P69849 1222 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 POM121L1PQ3SYA9 428 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 FAM46CQ5VWP2 391 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 TFAP2DQ7Z6R9 452 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 PHLDB2Q86SQ0 1253 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 ZNF677Q86XU0 584 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 AADATQ8N5Z0 425 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 ATP11CQ8NB49 1132 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 OR52K2Q8NGK3 314 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 SLC20A1Q8WUM9 679 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 CFAP57Q96MR6 1250 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 GANQ9H2C0 597 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 ADAMTS1Q9UHI8 967 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 KLK13Q9UKR3 277 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 NEUROG3Q9Y4Z2 214 aa22.64■■□□□ 1.21
LSM6-203ENST00000503982 CEP295Q9C0D2 2601 aa22.63■■□□□ 1.21
LSM6-203ENST00000503982 PLK4O00444 970 aa22.63■■□□□ 1.21
LSM6-203ENST00000503982 FLRT2O43155 660 aa22.63■■□□□ 1.21
LSM6-203ENST00000503982 FLT3P36888 993 aa22.63■■□□□ 1.21
LSM6-203ENST00000503982 RACK1P63244 317 aaKnown RBP22.63■■□□□ 1.21
LSM6-203ENST00000503982 ATP11AP98196 1134 aa22.63■■□□□ 1.21
LSM6-203ENST00000503982 IL9RQ01113 521 aa22.63■■□□□ 1.21
LSM6-203ENST00000503982 CDO1Q16878 200 aa22.63■■□□□ 1.21
LSM6-203ENST00000503982 ALFQ53S48 1182 aa22.63■■□□□ 1.21
LSM6-203ENST00000503982 CDKAL1Q5VV42 579 aa22.63■■□□□ 1.21
LSM6-203ENST00000503982 Q6ZVU0 165 aa22.63■■□□□ 1.21
LSM6-203ENST00000503982 PNPLA1Q8N8W4 532 aa22.63■■□□□ 1.21
LSM6-203ENST00000503982 PGAP3Q96FM1 320 aaPredicted RBP22.63■■□□□ 1.21
LSM6-203ENST00000503982 CCDC114Q96M63 670 aa22.63■■□□□ 1.21
LSM6-203ENST00000503982 C2orf49Q9BVC5 232 aaPredicted RBP22.63■■□□□ 1.21
LSM6-203ENST00000503982 TMPRSS4Q9NRS4 437 aa22.63■■□□□ 1.21
LSM6-203ENST00000503982 SEPT11Q9NVA2 429 aaKnown RBP22.63■■□□□ 1.21
LSM6-203ENST00000503982 TMEM51Q9NW97 253 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms