RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 DEFB107AQ8IZN7 70 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 FNDC5Q8NAU1 212 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 C11orf24Q96F05 449 aaPredicted RBP11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 USP21Q9UK80 565 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 SORCS3Q9UPU3 1222 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 GYG1P46976 350 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 SCNN1DP51172 638 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 NR1H2P55055 460 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 SCN1BQ07699 218 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 TEX47Q8TBZ9 253 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 SEPHS2Q99611 448 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 INTS2Q9H0H0 1204 aaKnown RBP11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 CUEDC1Q9NWM3 386 aaPredicted RBP11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 DBR1Q9UK59 544 aaKnown RBP11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 PHTF1Q9UMS5 762 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 CARNS1A5YM72 827 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 CPA3P15088 417 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 CRABP2P29373 138 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 IRAK1P51617 712 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 CCZ1BP86790 482 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 CCZ1P86791 482 aaPredicted RBP11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 SLC10A7Q0GE19 358 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 GAS2L3Q86XJ1 694 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 MED8Q96G25 268 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 SENP6Q9GZR1 1112 aaPredicted RBP11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 PLEKHA1Q9HB21 404 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 TTC37Q6PGP7 1564 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 VSTM5A8MXK1 200 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 OR1I1O60431 355 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 NMT1P30419 496 aaKnown RBP11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 CDK7P50613 346 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 SLC9A4Q6AI14 798 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 HSDL2Q6YN16 418 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 DEF8Q6ZN54 512 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 NET1Q7Z628 596 aaPredicted RBP11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 OR2L3Q8NG85 312 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 BORCS5Q969J3 196 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 DGCR6LQ9BY27 220 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 DCLK3Q9C098 648 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 SLC39A8Q9C0K1 460 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 COMMD3-BMI1R4GMX3 469 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 NCAPD2Q15021 1401 aa11.37□□□□□ -0.59
AC055713.1-201ENST00000498967 A0A0G2JMP0 313 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 SERPINB7O75635 380 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 COX7A2P14406 83 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 DGCR6Q14129 220 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 TFDP3Q5H9I0 405 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 OR4M2Q8NGB6 313 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 OTUB2Q96DC9 234 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 EDC3Q96F86 508 aaKnown RBP11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 ZNF607Q96SK3 696 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 SEPT5Q99719 369 aaPredicted RBP11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 SLC25A23Q9BV35 468 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 FAIM2Q9BWQ8 316 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 BSDC1Q9NW68 430 aaPredicted RBP11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 GGT7Q9UJ14 662 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 FBXO9Q9UK97 447 aaPredicted RBP11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 ZBTB5O15062 677 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 STAU1O95793 577 aaKnown RBP11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 VIL1P09327 827 aaKnown RBP11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 RPL4P36578 427 aaKnown RBP11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 PDK2Q15119 407 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 PTGISQ16647 500 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 IKZF3Q9UKT9 509 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 PBRM1Q86U86 1689 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 HSBP1L1C9JCN9 74 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 BTBD19C9JJ37 291 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 F5H5T6 163 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 AMIGO1Q86WK6 493 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 MCEEQ96PE7 176 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 POLR3FQ9H1D9 316 aaPredicted RBP11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 TNFSF13BQ9Y275 285 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 PDXKO00764 312 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 CYP1A1P04798 512 aaPredicted RBP11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 IFNA16P05015 189 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 DBTP11182 482 aaKnown RBP11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 HSD17B3P37058 310 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 STK40Q8N2I9 435 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 FAM13CQ8NE31 585 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 PTCD3Q96EY7 689 aaKnown RBP11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 PFDN5Q99471 154 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 RTKNQ9BST9 563 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 DNAJC28Q9NX36 388 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 ABCB11O95342 1321 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 MYH14Q7Z406 1995 aaKnown RBP11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 RPP38P78345 283 aaKnown RBP11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 SCGB2A2Q13296 93 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 IRGCQ6NXR0 463 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 KLHL23Q8NBE8 558 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 PLEKHF1Q96S99 279 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 YME1L1Q96TA2 773 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 OSGEPL1Q9H4B0 414 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 FAM49BQ9NUQ9 324 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 THAP1Q9NVV9 213 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 KIAA1257Q9ULG3 409 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 ARPC4-TTLL3A0A0A6YYG9 625 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 H7C4K7 107 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 PDCD5O14737 125 aa11.36□□□□□ -0.59
AC055713.1-201ENST00000498967 ORC5O43913 435 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms