RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 PGAP3Q96FM1 320 aaPredicted RBP8.75□□□□□ -1.01
SNX13-212ENST00000498463 GPATCH1Q9BRR8 931 aaKnown RBP8.75□□□□□ -1.01
SNX13-212ENST00000498463 STRA6Q9BX79 667 aa8.75□□□□□ -1.01
SNX13-212ENST00000498463 KLHL4Q9C0H6 718 aa8.75□□□□□ -1.01
SNX13-212ENST00000498463 C20orf141Q9NUB4 165 aa8.75□□□□□ -1.01
SNX13-212ENST00000498463 ABHD10Q9NUJ1 306 aa8.75□□□□□ -1.01
SNX13-212ENST00000498463 CWC25Q9NXE8 425 aaPredicted RBP8.75□□□□□ -1.01
SNX13-212ENST00000498463 CPSF2Q9P2I0 782 aaKnown RBP8.75□□□□□ -1.01
SNX13-212ENST00000498463 SLC25A13Q9UJS0 675 aa8.75□□□□□ -1.01
SNX13-212ENST00000498463 INTS6Q9UL03 887 aaKnown RBP8.75□□□□□ -1.01
SNX13-212ENST00000498463 GABRQQ9UN88 632 aa8.75□□□□□ -1.01
SNX13-212ENST00000498463 MAP3K2Q9Y2U5 619 aa8.75□□□□□ -1.01
SNX13-212ENST00000498463 A8MXE2 369 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 AHRRA9YTQ3 701 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 BTBD18B2RXH4 712 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 CEP104O60308 925 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 TGDSO95455 350 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 GALTP07902 379 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 ZNF8P17098 575 aaPredicted RBP8.74□□□□□ -1.01
SNX13-212ENST00000498463 HOXC13P31276 330 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 GJC1P36383 396 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 JAK3P52333 1124 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 EFNA5P52803 228 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 MRPL12P52815 198 aaKnown RBP8.74□□□□□ -1.01
SNX13-212ENST00000498463 ITIH3Q06033 890 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 TNFAIP1Q13829 316 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 DPCR1Q3MIW9 517 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 SPDYE7PQ495Y7 208 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 TCP11X2Q5H9J9 407 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 TCTN3Q6NUS6 607 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 KYAT3Q6YP21 454 aaKnown RBP8.74□□□□□ -1.01
SNX13-212ENST00000498463 PTCHD4Q6ZW05 846 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 RNF144BQ7Z419 303 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 GPR149Q86SP6 731 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 OR8H3Q8N146 312 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 POMGNT2Q8NAT1 580 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 SRFBP1Q8NEF9 429 aaKnown RBP8.74□□□□□ -1.01
SNX13-212ENST00000498463 LPIN2Q92539 896 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 C1orf74Q96LT6 269 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 MAP7D2Q96T17 732 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 FBRSL1Q9HCM7 1045 aaKnown RBP8.74□□□□□ -1.01
SNX13-212ENST00000498463 TMEM74BQ9NUR3 256 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 GIMAP4Q9NUV9 329 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 MARCH4Q9P2E8 410 aaPredicted RBP8.74□□□□□ -1.01
SNX13-212ENST00000498463 MGAT4CQ9UBM8 478 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 FRMD4BQ9Y2L6 1034 aa8.74□□□□□ -1.01
SNX13-212ENST00000498463 GLOD5A6NK44 160 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 H0Y626 953 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 AP4M1O00189 453 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 CES2O00748 559 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 LAMTOR5O43504 91 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 LIASO43766 372 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 SEC31AO94979 1220 aaKnown RBP8.73□□□□□ -1.01
SNX13-212ENST00000498463 SCAF4O95104 1147 aaKnown RBP8.73□□□□□ -1.01
SNX13-212ENST00000498463 RB1P06400 928 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 PKMP14618 531 aaKnown RBP8.73□□□□□ -1.01
SNX13-212ENST00000498463 DUSP1P28562 367 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 FMO4P31512 558 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 SLC8A1P32418 973 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 NRIP1P48552 1158 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 LMAN1P49257 510 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 AGTR2P50052 363 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 ZNF41P51814 821 aaPredicted RBP8.73□□□□□ -1.01
SNX13-212ENST00000498463 PPP2R5CQ13362 524 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 ZNF618Q5T7W0 954 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 ADALQ6DHV7 355 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 PRRT2Q7Z6L0 340 aaPredicted RBP8.73□□□□□ -1.01
SNX13-212ENST00000498463 SGMS1Q86VZ5 419 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 THNSL1Q8IYQ7 743 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 ADGRF3Q8IZF5 1079 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 MYCBPAPQ8TBZ2 947 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 NEK9Q8TD19 979 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 PRPF31Q8WWY3 499 aaKnown RBP8.73□□□□□ -1.01
SNX13-212ENST00000498463 VPS33AQ96AX1 596 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 MRPL9Q9BYD2 267 aaKnown RBP8.73□□□□□ -1.01
SNX13-212ENST00000498463 ARHGEF3Q9NR81 526 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 SH2B3Q9UQQ2 575 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 SESN1Q9Y6P5 492 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 FLT1P17948 1338 aa8.73□□□□□ -1.01
SNX13-212ENST00000498463 TCAF2A6NFQ2 919 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 TRIM64A6NGJ6 449 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 TRIM64BA6NI03 449 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 KCNJ18B7U540 433 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 PI4K2BG5E9Z4 385 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 CTDSP2O14595 271 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 TUBBP07437 444 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 SELLP14151 372 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 GABRB1P18505 474 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 CTGFP29279 349 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 THPOP40225 353 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 DIO1P49895 249 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 SCNN1GP51170 649 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 TPTEP56180 551 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 SLC37A1P57057 533 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 GPC5P78333 572 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 SHC2P98077 582 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 TFCP2Q12800 502 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 CSTF3Q12996 717 aaKnown RBP8.72□□□□□ -1.01
SNX13-212ENST00000498463 FRG1Q14331 258 aaKnown RBP8.72□□□□□ -1.01
SNX13-212ENST00000498463 COG2Q14746 738 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms