RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 MYO1FO00160 1098 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 CYB561D2O14569 222 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 KCNK3O14649 394 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 PTGESO14684 152 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 NCK2O43639 380 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 SRGAP2O75044 1071 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 TADA3O75528 432 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 GJB5O95377 273 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 CALCAP01258 141 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 GSNP06396 782 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 SETSIPP0DME0 302 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 MMP8P22894 467 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 MCM3P25205 808 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 CETN2P41208 172 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 SLC1A1P43005 524 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 NDST1P52848 882 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 SLC8A3P57103 927 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 LILRA4P59901 499 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 FAM189BP81408 668 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 ITIH3Q06033 890 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 GRIK3Q13003 919 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 ZNF268Q14587 947 aaPredicted RBP5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 GPNMBQ14956 572 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 PTPROQ16827 1216 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 CRB2Q5IJ48 1285 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 TEX35Q5T0J7 233 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 CDCP2Q5VXM1 449 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 PLEKHA7Q6IQ23 1121 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 CRIP3Q6Q6R5 217 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 LCLAT1Q6UWP7 414 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 DSTYKQ6XUX3 929 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 USP51Q70EK9 711 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 SLC24A5Q71RS6 500 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 MON1BQ7L1V2 547 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 LRRC8DQ7L1W4 858 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 NT5DC3Q86UY8 548 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 METTL23Q86XA0 190 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 ECHDC2Q86YB7 292 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 PASD1Q8IV76 773 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 CRYBG2Q8N1P7 616 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 TMEM86AQ8N2M4 240 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 LRRC57Q8N9N7 239 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 RNF169Q8NCN4 708 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 OR6B3Q8NGW1 331 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 SPATA18Q8TC71 538 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 URGCPQ8TCY9 931 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 SEPT8Q92599 483 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 RABGGTAQ92696 567 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 APBB2Q92870 758 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 HES6Q96HZ4 224 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 MSLNLQ96KJ4 702 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 CAPZA3Q96KX2 299 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 GAD1Q99259 594 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 NAP1L3Q99457 506 aaPredicted RBP5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 RAD9AQ99638 391 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 C11orf70Q9BRQ4 267 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 ELOVL4Q9GZR5 314 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 SDCBP2Q9H190 292 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 SMOC2Q9H3U7 446 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 SMYD3Q9H7B4 428 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 SYNCQ9H7C4 482 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 ASH1LQ9NR48 2969 aaKnown RBP5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 SPATA6Q9NWH7 488 aaPredicted RBP5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 IP6K2Q9UHH9 426 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 ST6GALNAC2Q9UJ37 374 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 CD207Q9UJ71 328 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 ALG6Q9Y672 507 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 R4GN57 208 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 WDR87Q6ZQQ6 2873 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 MAST4O15021 2626 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 MYH10P35580 1976 aa5.55□□□□□ -1.52
HMGXB4-208ENST00000498325 PTPRSQ13332 1948 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 FLNBO75369 2602 aaKnown RBP5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 PDCD11Q14690 1871 aaKnown RBP5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 EP300Q09472 2414 aaPredicted RBP5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 TMEM110-MUSTN1A8MSY1 372 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 C9IYK1 514 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 H3BNC9 293 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 M0QYV0 167 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 O00370 1275 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 PODXLO00592 558 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 PPEF2O14830 753 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 ZNF185O15231 689 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 PI15O43692 258 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 SPOPO43791 374 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 CEP104O60308 925 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 MGEA5O60502 916 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 FZD7O75084 574 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 BAIAP3O94812 1187 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 PROSCO94903 275 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 DESP17661 470 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 WARSP23381 471 aaKnown RBP5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 RRM1P23921 792 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 TACR1P25103 407 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 CTNNA2P26232 953 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 PMLP29590 882 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 RFC2P35250 354 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 MLH1P40692 756 aa5.54□□□□□ -1.52
HMGXB4-208ENST00000498325 CCNFP41002 786 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms