RNA–Protein interactions for RNA: ENST00000497791.5

UMPS-209, Transcript of uridine monophosphate synthetase, human

TSL 1 (best)

Gene UMPS, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UMPS-209	ENST00000497791	EIF2D	P41214	584 aa	Known RBP	15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	GNA12	Q03113	381 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	PAFAH1B3	Q15102	231 aa	Known RBP	15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	PPP2R5E	Q16537	467 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	PLEKHG6	Q3KR16	790 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	TMEM196	Q5HYL7	178 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	LEKR1	Q6ZMV7	388 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	ADAT2	Q7Z6V5	191 aa	Known RBP	15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	VSIG1	Q86XK7	387 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	ZNF687	Q8N1G0	1237 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	FAM3C	Q92520	227 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	ARHGEF2	Q92974	986 aa	Known RBP	15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	OSBPL9	Q96SU4	736 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	NAPG	Q99747	312 aa	Predicted RBP	15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	MAK16	Q9BXY0	300 aa	Known RBP	15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	SLC2A11	Q9BYW1	496 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	MUC3B	Q9H195	1237 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	CARD9	Q9H257	536 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	RBM12	Q9NTZ6	932 aa	Known RBP	15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	DTL	Q9NZJ0	730 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	KIAA1522	Q9P206	1035 aa	Predicted RBP	15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	SNX12	Q9UMY4	172 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	SLC27A6	Q9Y2P4	619 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791		K7EQS6	105 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	APOL1	O14791	398 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	RAMP2	O60895	175 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	GLUL	P15104	373 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	TARS	P26639	723 aa	Known RBP	15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	PTPN7	P35236	360 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	COPS2	P61201	443 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	POLD3	Q15054	466 aa	Predicted RBP	15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	PITRM1	Q5JRX3	1037 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	C6orf118	Q5T5N4	469 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	EMC10	Q5UCC4	262 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	SETD3	Q86TU7	594 aa	Predicted RBP	15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	CYB5D2	Q8WUJ1	264 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	SPON2	Q9BUD6	331 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	R3HDM2	Q9Y2K5	976 aa	Known RBP	15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	HEY1	Q9Y5J3	304 aa		15.22	■□□□□ 0.03
UMPS-209	ENST00000497791	CACNA1I	Q9P0X4	2223 aa		15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	USP34	Q70CQ2	3546 aa		15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	TBC1D3B	A6NDS4	549 aa		15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	DFFA	O00273	331 aa		15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	DCX	O43602	365 aa		15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	GRIA2	P42262	883 aa		15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	STK19	P49842	368 aa	Predicted RBP	15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	PAPOLA	P51003	745 aa	Known RBP	15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	SEC13	P55735	322 aa		15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	STARD6	P59095	220 aa		15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	KLF1	Q13351	362 aa	Predicted RBP	15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	PAPD7	Q5XG87	772 aa	Known RBP	15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	MBLAC2	Q68D91	279 aa		15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	BBS12	Q6ZW61	710 aa		15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	EDA	Q92838	391 aa		15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	VPS51	Q9UID3	782 aa		15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	VPS28	Q9UK41	221 aa		15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	WDFY4	Q6ZS81	3184 aa		15.21	■□□□□ 0.03
UMPS-209	ENST00000497791	CTAGE9	A4FU28	777 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	15.2	■□□□□ 0.02
UMPS-209	ENST00000497791		J3KR12	359 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	CEP104	O60308	925 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	ZMPSTE24	O75844	475 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	MT-CO1	P00395	513 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	APOD	P05090	189 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	MSN	P26038	577 aa	Known RBP	15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	NDST2	P52849	883 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	PLK1	P53350	603 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	AMPD2	Q01433	879 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	FZD5	Q13467	585 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	CCIN	Q13939	588 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	SEL1L2	Q5TEA6	688 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	LINGO4	Q6UY18	593 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	ZNF852	Q6ZMS4	543 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	SLC13A5	Q86YT5	568 aa	Predicted RBP	15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	CCDC117	Q8IWD4	279 aa	Predicted RBP	15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	RPL10L	Q96L21	214 aa	Known RBP	15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	ACE2	Q9BYF1	805 aa	Predicted RBP	15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	CIPC	Q9C0C6	399 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	MAGEH1	Q9H213	219 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	C10orf88	Q9H8K7	445 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	TBC1D17	Q9HA65	648 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	ATP13A1	Q9HD20	1204 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	POLR3B	Q9NW08	1133 aa	Predicted RBP	15.2	■□□□□ 0.02
UMPS-209	ENST00000497791	CKAP5	Q14008	2032 aa		15.2	■□□□□ 0.02
UMPS-209	ENST00000497791		A0A0A0MRY4	1105 aa		15.19	■□□□□ 0.02
UMPS-209	ENST00000497791	CBX4	O00257	560 aa		15.19	■□□□□ 0.02
UMPS-209	ENST00000497791	CD160	O95971	181 aa		15.19	■□□□□ 0.02
UMPS-209	ENST00000497791	FGG	P02679	453 aa		15.19	■□□□□ 0.02
UMPS-209	ENST00000497791	ARF5	P84085	180 aa		15.19	■□□□□ 0.02
UMPS-209	ENST00000497791	PRKCQ	Q04759	706 aa		15.19	■□□□□ 0.02
UMPS-209	ENST00000497791	SIGLEC14	Q08ET2	396 aa		15.19	■□□□□ 0.02
UMPS-209	ENST00000497791	SERINC3	Q13530	473 aa		15.19	■□□□□ 0.02
UMPS-209	ENST00000497791	SIX1	Q15475	284 aa	Predicted RBP	15.19	■□□□□ 0.02
UMPS-209	ENST00000497791	PTPRN	Q16849	979 aa		15.19	■□□□□ 0.02
UMPS-209	ENST00000497791	KCTD19	Q17RG1	926 aa	Predicted RBP	15.19	■□□□□ 0.02
UMPS-209	ENST00000497791	EGFLAM	Q63HQ2	1017 aa		15.19	■□□□□ 0.02
UMPS-209	ENST00000497791	IL31	Q6EBC2	164 aa		15.19	■□□□□ 0.02
UMPS-209	ENST00000497791	PKN3	Q6P5Z2	889 aa		15.19	■□□□□ 0.02
UMPS-209	ENST00000497791	AHI1	Q8N157	1196 aa		15.19	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms