RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 RPL21P46778 160 aaKnown RBP14.55□□□□□ -0.08
VPS26A-209ENST00000497564 MAPKAPK2P49137 400 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 NDST2P52849 883 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 PPIDQ08752 370 aaKnown RBP14.55□□□□□ -0.08
VPS26A-209ENST00000497564 RABGAP1LQ5R372 815 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 CHST9Q7L1S5 443 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 BMP8AQ7Z5Y6 402 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 ARHGAP12Q8IWW6 846 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 LGI2Q8N0V4 545 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 CPXM2Q8N436 756 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 KIAA1958Q8N8K9 716 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 TFB1MQ8WVM0 346 aaKnown RBP14.55□□□□□ -0.08
VPS26A-209ENST00000497564 HNRNPLLQ8WVV9 542 aaKnown RBP14.55□□□□□ -0.08
VPS26A-209ENST00000497564 ZSWIM3Q96MP5 696 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 RPRD1AQ96P16 312 aaPredicted RBP14.55□□□□□ -0.08
VPS26A-209ENST00000497564 TSGA13Q96PP4 275 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 KXD1Q9BQD3 176 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 ARGLU1Q9NWB6 273 aaPredicted RBP14.55□□□□□ -0.08
VPS26A-209ENST00000497564 MPP6Q9NZW5 540 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 WHRNQ9P202 907 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 IGSF9Q9P2J2 1179 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 DUSP12Q9UNI6 340 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 CACNA1HO95180 2353 aa14.55□□□□□ -0.08
VPS26A-209ENST00000497564 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.54□□□□□ -0.08
VPS26A-209ENST00000497564 E2F8A0AVK6 867 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 ESYT3A0FGR9 886 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 LEFTY2O00292 366 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 NDC80O14777 642 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 ERLIN1O75477 346 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 CNTN5O94779 1100 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 RBL1P28749 1068 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 AVPR1AP37288 418 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 GARSP41250 739 aaKnown RBP14.54□□□□□ -0.08
VPS26A-209ENST00000497564 CARSP49589 748 aaKnown RBP14.54□□□□□ -0.08
VPS26A-209ENST00000497564 IRAK1P51617 712 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 GDF10P55107 478 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 CDH4P55283 916 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 P3H1Q32P28 736 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 ALFQ53S48 1182 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 IER5LQ5T953 404 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 C4orf22Q6V702 233 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 FBXL6Q8N531 539 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 GLIS1Q8NBF1 620 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 BBOF1Q8ND07 529 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 FATE1Q969F0 183 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 SNF8Q96H20 258 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 PLA2G2FQ9BZM2 168 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 GRHL1Q9NZI5 618 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 CFAP97Q9P2B7 532 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 ASIC3Q9UHC3 531 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 SH3BP1Q9Y3L3 701 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 COL4A3Q01955 1670 aa14.54□□□□□ -0.08
VPS26A-209ENST00000497564 DMDP11532 3685 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 MYO15AQ9UKN7 3530 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 ANKRD36A6QL64 1941 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 KMT2EQ8IZD2 1858 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 C5orf60A6NFR6 353 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 KCNN4O15554 427 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 MTSS1O43312 755 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 CLDN11O75508 207 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 GCATO75600 419 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 SEC31AO94979 1220 aaKnown RBP14.53□□□□□ -0.08
VPS26A-209ENST00000497564 MAP3K6O95382 1288 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 VAV1P15498 845 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 ECHS1P30084 290 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 YBEYP58557 167 aaPredicted RBP14.53□□□□□ -0.08
VPS26A-209ENST00000497564 CAV1Q03135 178 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 USP4Q13107 963 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 TRADDQ15628 312 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 MAP9Q49MG5 647 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 HEATR6Q6AI08 1181 aaKnown RBP14.53□□□□□ -0.08
VPS26A-209ENST00000497564 RFWD3Q6PCD5 774 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 FBXO38Q6PIJ6 1188 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 TP53INP2Q8IXH6 220 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 FAM71DQ8N9W8 422 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 HJURPQ8NCD3 748 aaPredicted RBP14.53□□□□□ -0.08
VPS26A-209ENST00000497564 AENQ8WTP8 325 aaKnown RBP14.53□□□□□ -0.08
VPS26A-209ENST00000497564 HTR3CQ8WXA8 447 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 USP13Q92995 863 aaPredicted RBP14.53□□□□□ -0.08
VPS26A-209ENST00000497564 LRRC45Q96CN5 670 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 MYEOVQ96EZ4 313 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 PRICKLE1Q96MT3 831 aaPredicted RBP14.53□□□□□ -0.08
VPS26A-209ENST00000497564 LGMNQ99538 433 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 FERMT1Q9BQL6 677 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 DPH5Q9H2P9 285 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 NOL6Q9H6R4 1146 aaKnown RBP14.53□□□□□ -0.08
VPS26A-209ENST00000497564 C10orf88Q9H8K7 445 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 KIF9Q9HAQ2 790 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 ZDHHC18Q9NUE0 388 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 TDP1Q9NUW8 608 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 NDFIP2Q9NV92 336 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 SNX24Q9Y343 169 aa14.53□□□□□ -0.08
VPS26A-209ENST00000497564 ZFP37Q9Y6Q3 630 aaPredicted RBP14.53□□□□□ -0.08
VPS26A-209ENST00000497564 A0A1B0GVM2 712 aa14.52□□□□□ -0.09
VPS26A-209ENST00000497564 KRBA1A5PL33 1030 aa14.52□□□□□ -0.09
VPS26A-209ENST00000497564 TCAF2A6NFQ2 919 aa14.52□□□□□ -0.09
VPS26A-209ENST00000497564 DNALI1O14645 258 aaPredicted RBP14.52□□□□□ -0.09
VPS26A-209ENST00000497564 IFNB1P01574 187 aa14.52□□□□□ -0.09
VPS26A-209ENST00000497564 MYBL2P10244 700 aa14.52□□□□□ -0.09
VPS26A-209ENST00000497564 ETS1P14921 441 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms