RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 SDHBP21912 280 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 SDC4P31431 198 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 VIPR1P32241 457 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 OR1D2P34982 312 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 AARSP49588 968 aaKnown RBP eCLIP4.96□□□□□ -1.62
CMSS1-209ENST00000497345 RWDD2BP57060 319 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 SNX16P57768 344 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 YBX1P67809 324 aaKnown RBP4.96□□□□□ -1.62
CMSS1-209ENST00000497345 PITX1P78337 314 aaPredicted RBP4.96□□□□□ -1.62
CMSS1-209ENST00000497345 SLC7A5Q01650 507 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 NME3Q13232 169 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 MRPL58Q14197 206 aaKnown RBP4.96□□□□□ -1.62
CMSS1-209ENST00000497345 KRT81Q14533 505 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 PSMD5Q16401 504 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 MGAT5BQ3V5L5 792 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 CCDC14Q49A88 953 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 CFAP221Q4G0U5 840 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 DCAF6Q58WW2 860 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 TMEM240Q5SV17 173 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 FAM182AQ5T1J6 154 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 SEL1L2Q5TEA6 688 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 DCAF12L1Q5VU92 463 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 ZNF280DQ6N043 979 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 TRNP1Q6NT89 227 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 PPP1R2P3Q6NXS1 205 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 GALNT18Q6P9A2 607 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 OLFML1Q6UWY5 402 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 RSPO2Q6UXX9 243 aaPredicted RBP4.96□□□□□ -1.62
CMSS1-209ENST00000497345 C4orf50Q6ZRC1 276 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 B4GALNT4Q76KP1 1039 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 SLITRK4Q8IW52 837 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 TMEM151BQ8IW70 566 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 RHOT1Q8IXI2 618 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 CCDC33Q8N5R6 958 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 COLGALT1Q8NBJ5 622 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 NETO2Q8NC67 525 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 KCTD6Q8NC69 237 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 C3orf20Q8ND61 904 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 ZMIZ2Q8NF64 920 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 SCAMP5Q8TAC9 235 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.96□□□□□ -1.62
CMSS1-209ENST00000497345 FAM172AQ8WUF8 416 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 C1orf54Q8WWF1 131 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 RAPGEF5Q92565 580 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 HAUS1Q96CS2 278 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 MCRS1Q96EZ8 462 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 SMARCD1Q96GM5 515 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 TMEM169Q96HH4 297 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 HES6Q96HZ4 224 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 IGSF21Q96ID5 467 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 VCPIP1Q96JH7 1222 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 FCRL2Q96LA5 508 aaPredicted RBP4.96□□□□□ -1.62
CMSS1-209ENST00000497345 SIGLEC10Q96LC7 697 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 RNPC3Q96LT9 517 aaKnown RBP4.96□□□□□ -1.62
CMSS1-209ENST00000497345 TMEM175Q9BSA9 504 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 TTPALQ9BTX7 342 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 VN1R3Q9BXE9 311 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 MAGEB5Q9BZ81 275 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 ZCWPW1Q9H0M4 648 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 ZCCHC4Q9H5U6 513 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 CNTD2Q9H8S5 307 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 CERS4Q9HA82 394 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 DMAP1Q9NPF5 467 aaPredicted RBP4.96□□□□□ -1.62
CMSS1-209ENST00000497345 RBM12Q9NTZ6 932 aaKnown RBP4.96□□□□□ -1.62
CMSS1-209ENST00000497345 SPG21Q9NZD8 308 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 WDR35Q9P2L0 1181 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 FBXL21Q9UKT6 434 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 MAGED2Q9UNF1 606 aaPredicted RBP4.96□□□□□ -1.62
CMSS1-209ENST00000497345 NAALADL1Q9UQQ1 740 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.96□□□□□ -1.62
CMSS1-209ENST00000497345 SNX10Q9Y5X0 201 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 SLC4A7Q9Y6M7 1214 aa4.96□□□□□ -1.62
CMSS1-209ENST00000497345 ALPK3Q96L96 1907 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 CCDC66A2RUB6 948 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 YJEFN3A6XGL0 299 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 MIF4GDA9UHW6 222 aaKnown RBP4.95□□□□□ -1.62
CMSS1-209ENST00000497345 E7ENQ6 273 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 TMEM189-UBE2V1I3L0A0 370 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 PGRMC1O00264 195 aaKnown RBP4.95□□□□□ -1.62
CMSS1-209ENST00000497345 SYN3O14994 580 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 MDM4O15151 490 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 PRPSAP2O60256 369 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 TRUB2O95900 331 aaKnown RBP4.95□□□□□ -1.62
CMSS1-209ENST00000497345 ZBED1O96006 694 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 HMBSP08397 361 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 CD48P09326 243 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 RALAP11233 206 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 NCAM1P13591 858 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 ATP2A2P16615 1042 aaKnown RBP4.95□□□□□ -1.62
CMSS1-209ENST00000497345 LAG3P18627 525 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 ENDOUP21128 410 aaKnown RBP4.95□□□□□ -1.62
CMSS1-209ENST00000497345 CTNNA2P26232 953 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 IL1R2P27930 398 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 MIPP30301 263 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 BMP8BP34820 402 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 CTNNA1P35221 906 aaKnown RBP4.95□□□□□ -1.62
CMSS1-209ENST00000497345 CTNNB1P35222 781 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 SLC1A1P43005 524 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 ACADSBP45954 432 aa4.95□□□□□ -1.62
CMSS1-209ENST00000497345 GABRB2P47870 512 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms