RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 SGCAQ16586 387 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF674Q2M3X9 581 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CR1LQ2VPA4 569 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 TTMPQ5BVD1 217 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 FAM209BQ5JX69 171 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 C12orf60Q5U649 245 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 DAB2IPQ5VWQ8 1189 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 METTL21CQ5VZV1 264 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 IYDQ6PHW0 289 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CRELD2Q6UXH1 353 aaPredicted RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 TRIM72Q6ZMU5 477 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CYP4V2Q6ZWL3 525 aaPredicted RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PTRH1Q86Y79 214 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 TCAIMQ8N3R3 496 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 OR2C3Q8N628 320 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CSGALNACT2Q8N6G5 542 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF527Q8NB42 609 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 GMCL1P1Q8NEA9 526 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 URGCPQ8TCY9 931 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 HCAR2Q8TDS4 363 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 NSMCE1Q8WV22 266 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 KRT35Q92764 455 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF566Q969W8 418 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CHMP6Q96FZ7 201 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 HES6Q96HZ4 224 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 REXO5Q96IC2 774 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CCDC43Q96MW1 224 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 FAM193BQ96PV7 902 aaPredicted RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 TXN2Q99757 166 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 ACO2Q99798 780 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PTPN18Q99952 460 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 WACQ9BTA9 647 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PINK1Q9BXM7 581 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 MOV10L1Q9BXT6 1211 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 TRIM2Q9C040 744 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 MS4A5Q9H3V2 200 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 SPACA1Q9HBV2 294 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 SPON1Q9HCB6 807 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 VTA1Q9NP79 307 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 DDX28Q9NUL7 540 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 MYOTQ9UBF9 498 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 VPS28Q9UK41 221 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF215Q9UL58 517 aaPredicted RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 AGAP1Q9UPQ3 857 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 GAB2Q9UQC2 676 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 DERAQ9Y315 318 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PCDHGA3Q9Y5H0 932 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PCDHGA1Q9Y5H4 931 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 NPFFR2Q9Y5X5 522 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 DUSP10Q9Y6W6 482 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 ERICH3Q5RHP9 1530 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 ATP8B3O60423 1300 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ACEP12821 1306 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 FLT1P17948 1338 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 HMGXB3Q12766 1538 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 A0A0G2JLL6 359 aaPredicted RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 KANSL1LA0AUZ9 987 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 GPR89AB7ZAQ6 455 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 H0YCG3 227 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 MYO1FO00160 1098 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 SRGAP3O43295 1099 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 BUB1O43683 1085 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 GATCO43716 136 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 SEC22BO75396 215 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 SERPINB7O75635 380 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 BMP10O95393 424 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 CHGBP05060 677 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 SNRNP70P08621 437 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 GPR89BP0CG08 455 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 CKMT1AP12532 417 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 CPA3P15088 417 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 HLA-DPA1P20036 260 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 BMI1P35226 326 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 GARSP41250 739 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 STAT6P42226 847 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 TXKP42681 527 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 PTPN9P43378 593 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ITGA1P56199 1179 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 POLE2P56282 527 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 JAM2P57087 298 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ACTR1AP61163 376 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 GNAI1P63096 354 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ABATP80404 500 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 MRPS25P82663 173 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 FOXO4P98177 505 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 DSC2Q02487 901 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 BTKQ06187 659 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 DLX2Q07687 328 aaPredicted RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 C17orf67Q0P5P2 114 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 LRMPQ12912 555 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 RIPK1Q13546 671 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ADRM1Q16186 407 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ZSCAN23Q3MJ62 389 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 C1orf141Q5JVX7 400 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF852Q6ZMS4 543 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ANO5Q75V66 913 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 CHST15Q7LFX5 561 aaPredicted RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 YTHDF3Q7Z739 585 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 FAM160B2Q86V87 743 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 PRR18Q8N4B5 295 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms