RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 MTA1Q13330 715 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 RARS2Q5T160 578 aaKnown RBP17.29■□□□□ 0.36
LMNA-216ENST00000496738 AFMIDQ63HM1 303 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 ELMSAN1Q6PJG2 1045 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 Q6ZNB5 142 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 BBS7Q8IWZ6 715 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 PPIL6Q8IXY8 311 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 RIN3Q8TB24 985 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 ITFG1Q8TB96 612 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 SH3RF2Q8TEC5 729 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 PRCCQ92733 491 aaPredicted RBP17.29■□□□□ 0.36
LMNA-216ENST00000496738 SPATA13Q96N96 652 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 ETNK1Q9HBU6 452 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 KLHL8Q9P2G9 620 aaPredicted RBP17.29■□□□□ 0.36
LMNA-216ENST00000496738 LSM7Q9UK45 103 aaKnown RBP17.29■□□□□ 0.36
LMNA-216ENST00000496738 FARP1Q9Y4F1 1045 aaPredicted RBP17.29■□□□□ 0.36
LMNA-216ENST00000496738 RASA4BC9J798 803 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 RASA4O43374 803 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 HP1BP3Q5SSJ5 553 aaPredicted RBP17.29■□□□□ 0.36
LMNA-216ENST00000496738 LEKR1Q6ZMV7 388 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 SRLQ86TD4 932 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 UMODL1-AS1Q8N2C9 162 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 OR52K2Q8NGK3 314 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 UBLCP1Q8WVY7 318 aaPredicted RBP17.29■□□□□ 0.36
LMNA-216ENST00000496738 AZIN2Q96A70 460 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 AGAP3Q96P47 875 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 TASP1Q9H6P5 420 aa17.29■□□□□ 0.36
LMNA-216ENST00000496738 MRPS23Q9Y3D9 190 aaKnown RBP17.29■□□□□ 0.36
LMNA-216ENST00000496738 MAFKO60675 156 aa17.28■□□□□ 0.36
LMNA-216ENST00000496738 PRAMEF12O95522 483 aa17.28■□□□□ 0.36
LMNA-216ENST00000496738 ACVRL1P37023 503 aa17.28■□□□□ 0.36
LMNA-216ENST00000496738 CAV1Q03135 178 aa17.28■□□□□ 0.36
LMNA-216ENST00000496738 TCEAL5Q5H9L2 206 aa17.28■□□□□ 0.36
LMNA-216ENST00000496738 ACBD5Q5T8D3 534 aaPredicted RBP17.28■□□□□ 0.36
LMNA-216ENST00000496738 PID1Q7Z2X4 250 aa17.28■□□□□ 0.36
LMNA-216ENST00000496738 USP13Q92995 863 aaPredicted RBP17.28■□□□□ 0.36
LMNA-216ENST00000496738 FERMT1Q9BQL6 677 aa17.28■□□□□ 0.36
LMNA-216ENST00000496738 HPCAL4Q9UM19 191 aa17.28■□□□□ 0.36
LMNA-216ENST00000496738 TTLL3Q9Y4R7 772 aa17.28■□□□□ 0.36
LMNA-216ENST00000496738 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.28■□□□□ 0.36
LMNA-216ENST00000496738 RAMP2O60895 175 aa17.28■□□□□ 0.36
LMNA-216ENST00000496738 BANF1O75531 89 aa17.28■□□□□ 0.36
LMNA-216ENST00000496738 JCHAINP01591 159 aa17.28■□□□□ 0.36
LMNA-216ENST00000496738 HSPA9P38646 679 aaKnown RBP17.28■□□□□ 0.36
LMNA-216ENST00000496738 KCNC3Q14003 757 aa17.28■□□□□ 0.36
LMNA-216ENST00000496738 MORF4L2Q15014 288 aa17.28■□□□□ 0.36
LMNA-216ENST00000496738 ZKSCAN8Q15776 578 aaPredicted RBP17.28■□□□□ 0.36
LMNA-216ENST00000496738 TTC31Q49AM3 519 aaPredicted RBP17.28■□□□□ 0.36
LMNA-216ENST00000496738 SUGP1Q8IWZ8 645 aaKnown RBP17.28■□□□□ 0.36
LMNA-216ENST00000496738 NAT8LQ8N9F0 302 aa17.28■□□□□ 0.36
LMNA-216ENST00000496738 SFXN1Q9H9B4 322 aa17.28■□□□□ 0.36
LMNA-216ENST00000496738 J3KR12 359 aa17.27■□□□□ 0.36
LMNA-216ENST00000496738 TBL1XO60907 577 aa17.27■□□□□ 0.36
LMNA-216ENST00000496738 GLP2RO95838 553 aa17.27■□□□□ 0.36
LMNA-216ENST00000496738 APRTP07741 180 aa17.27■□□□□ 0.36
LMNA-216ENST00000496738 PSMB4P28070 264 aa17.27■□□□□ 0.36
LMNA-216ENST00000496738 NDST2P52849 883 aa17.27■□□□□ 0.36
LMNA-216ENST00000496738 HYAL1Q12794 435 aa17.27■□□□□ 0.36
LMNA-216ENST00000496738 POLD3Q15054 466 aaPredicted RBP17.27■□□□□ 0.36
LMNA-216ENST00000496738 C5orf22Q49AR2 442 aa17.27■□□□□ 0.36
LMNA-216ENST00000496738 LEMD2Q8NC56 503 aa17.27■□□□□ 0.36
LMNA-216ENST00000496738 ST13P5Q8NFI4 369 aaPredicted RBP17.27■□□□□ 0.36
LMNA-216ENST00000496738 ZNF419Q96HQ0 510 aaPredicted RBP17.27■□□□□ 0.36
LMNA-216ENST00000496738 BRD8Q9H0E9 1235 aa17.27■□□□□ 0.36
LMNA-216ENST00000496738 IPO11Q9UI26 975 aaKnown RBP17.27■□□□□ 0.36
LMNA-216ENST00000496738 STOML2Q9UJZ1 356 aa17.27■□□□□ 0.36
LMNA-216ENST00000496738 ARHGAP26Q9UNA1 814 aa17.27■□□□□ 0.36
LMNA-216ENST00000496738 A0A0D9SEW6 157 aa17.27■□□□□ 0.35
LMNA-216ENST00000496738 MAP2K7O14733 419 aa17.27■□□□□ 0.35
LMNA-216ENST00000496738 ZBTB24O43167 697 aaPredicted RBP17.27■□□□□ 0.35
LMNA-216ENST00000496738 PPFIA2O75334 1257 aa17.27■□□□□ 0.35
LMNA-216ENST00000496738 HSD17B3P37058 310 aa17.27■□□□□ 0.35
LMNA-216ENST00000496738 MAPKAPK2P49137 400 aa17.27■□□□□ 0.35
LMNA-216ENST00000496738 CDH4P55283 916 aa17.27■□□□□ 0.35
LMNA-216ENST00000496738 KCNJ11Q14654 390 aa17.27■□□□□ 0.35
LMNA-216ENST00000496738 UAP1Q16222 522 aaPredicted RBP17.27■□□□□ 0.35
LMNA-216ENST00000496738 TPGS1Q6ZTW0 290 aa17.27■□□□□ 0.35
LMNA-216ENST00000496738 PCGF5Q86SE9 256 aa17.27■□□□□ 0.35
LMNA-216ENST00000496738 ZCCHC9Q8N567 271 aaKnown RBP17.27■□□□□ 0.35
LMNA-216ENST00000496738 DDX50Q9BQ39 737 aaKnown RBP17.27■□□□□ 0.35
LMNA-216ENST00000496738 ZNF576Q9H609 170 aa17.27■□□□□ 0.35
LMNA-216ENST00000496738 PLK2Q9NYY3 685 aa17.27■□□□□ 0.35
LMNA-216ENST00000496738 SHOC2Q9UQ13 582 aa17.27■□□□□ 0.35
LMNA-216ENST00000496738 HELZP42694 1942 aaKnown RBP17.26■□□□□ 0.35
LMNA-216ENST00000496738 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.26■□□□□ 0.35
LMNA-216ENST00000496738 E7EVH7 732 aa17.26■□□□□ 0.35
LMNA-216ENST00000496738 CCNB1P14635 433 aa17.26■□□□□ 0.35
LMNA-216ENST00000496738 CCNCP24863 283 aa17.26■□□□□ 0.35
LMNA-216ENST00000496738 DDX6P26196 483 aaKnown RBP eCLIP17.26■□□□□ 0.353e-6■□□□□ 9
LMNA-216ENST00000496738 PMS2P54278 862 aa17.26■□□□□ 0.35
LMNA-216ENST00000496738 HTR3DQ70Z44 454 aa17.26■□□□□ 0.35
LMNA-216ENST00000496738 CARNMT1Q8N4J0 409 aa17.26■□□□□ 0.35
LMNA-216ENST00000496738 OR7D4Q8NG98 312 aa17.26■□□□□ 0.35
LMNA-216ENST00000496738 TXLNGYQ9BZA5 131 aa17.26■□□□□ 0.35
LMNA-216ENST00000496738 FAM129AQ9BZQ8 928 aa17.26■□□□□ 0.35
LMNA-216ENST00000496738 SEMA4AQ9H3S1 761 aa17.26■□□□□ 0.35
LMNA-216ENST00000496738 TDP1Q9NUW8 608 aa17.26■□□□□ 0.35
LMNA-216ENST00000496738 ARHGAP42A6NI28 874 aa17.26■□□□□ 0.35
LMNA-216ENST00000496738 OPHN1O60890 802 aa17.26■□□□□ 0.35
LMNA-216ENST00000496738 PACS2Q86VP3 889 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms