RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 INSCQ1MX18 579 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 ANKRD20A4Q4UJ75 823 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 NOMO2Q5JPE7 1267 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 CLLU1OSQ5K130 101 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 CES4AQ5XG92 561 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 SLC24A5Q71RS6 500 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 SCD5Q86SK9 330 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 LINC00523Q86TU6 105 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 ZNF280BQ86YH2 543 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 CRLF3Q8IUI8 442 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 SCN4BQ8IWT1 228 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 ARHGAP12Q8IWW6 846 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 KLHDC8BQ8IXV7 354 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 DCP1BQ8IZD4 617 aaKnown RBP13.32□□□□□ -0.28
GARNL3-220ENST00000496711 LZTR1Q8N653 840 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 LINC01599Q8WXQ3 324 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 UTP4Q969X6 686 aaKnown RBP13.32□□□□□ -0.28
GARNL3-220ENST00000496711 ISL2Q96A47 359 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 PGLYRP2Q96PD5 576 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 ZCWPW1Q9H0M4 648 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 ABI2Q9NYB9 513 aaPredicted RBP13.32□□□□□ -0.28
GARNL3-220ENST00000496711 SFMBT1Q9UHJ3 866 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 SOX13Q9UN79 622 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 GREB1Q4ZG55 1949 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 A8MUI8 341 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 ATP9BO43861 1147 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 PLIN3O60664 434 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 DDHD2O94830 711 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 SPRP35270 261 aaPredicted RBP13.31□□□□□ -0.28
GARNL3-220ENST00000496711 MAGEA12P43365 314 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 SERPINB8P50452 374 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 LIMK2P53671 638 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 IRX4P78413 519 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 MBTPS1Q14703 1052 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 FASTKD1Q53R41 847 aaKnown RBP13.31□□□□□ -0.28
GARNL3-220ENST00000496711 CERCAMQ5T4B2 595 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 SWT1Q5T5J6 900 aaKnown RBP13.31□□□□□ -0.28
GARNL3-220ENST00000496711 MAP3K21Q5TCX8 1036 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 TRAF7Q6Q0C0 670 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 ARHGAP36Q6ZRI8 547 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 RTN4RL1Q86UN2 441 aaPredicted RBP13.31□□□□□ -0.28
GARNL3-220ENST00000496711 ARID3BQ8IVW6 561 aaPredicted RBP13.31□□□□□ -0.28
GARNL3-220ENST00000496711 COLGALT2Q8IYK4 626 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 PPP1R14CQ8TAE6 165 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 USP33Q8TEY7 942 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 GLT1D1Q96MS3 346 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 SERPINB11Q96P15 392 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 APOL2Q9BQE5 337 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 TUBB6Q9BUF5 446 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 FBXO6Q9NRD1 293 aaPredicted RBP13.31□□□□□ -0.28
GARNL3-220ENST00000496711 SNX15Q9NRS6 342 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 HBS1LQ9Y450 684 aaKnown RBP13.31□□□□□ -0.28
GARNL3-220ENST00000496711 A0A1W2PQH9 124 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 MOXD2PA6NHM9 499 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 CACNG3O60359 315 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 WFS1O76024 890 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 OAZ2O95190 189 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 PTPN4P29074 926 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 TYK2P29597 1187 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 PGFP49763 221 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 SP3Q02447 781 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 STX3Q13277 289 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 FAM91A1Q658Y4 838 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 MBLAC2Q68D91 279 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 C16orf46Q6P387 395 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 STRA8Q7Z7C7 330 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 KCNMB4Q86W47 210 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 DCLK2Q8N568 766 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 CNTD1Q8N815 330 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 MFSD3Q96ES6 412 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 FUBP3Q96I24 572 aaKnown RBP eCLIP13.31□□□□□ -0.28
GARNL3-220ENST00000496711 FCRL2Q96LA5 508 aaPredicted RBP13.31□□□□□ -0.28
GARNL3-220ENST00000496711 WWP1Q9H0M0 922 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 NMUR1Q9HB89 426 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 UBP1Q9NZI7 540 aa13.31□□□□□ -0.28
GARNL3-220ENST00000496711 AAR2Q9Y312 384 aaKnown RBP13.31□□□□□ -0.28
GARNL3-220ENST00000496711 CENPFP49454 3210 aa13.3□□□□□ -0.28
GARNL3-220ENST00000496711 C2orf71A6NGG8 1288 aa13.3□□□□□ -0.28
GARNL3-220ENST00000496711 GSRP00390 522 aa13.3□□□□□ -0.28
GARNL3-220ENST00000496711 PROCP04070 461 aa13.3□□□□□ -0.28
GARNL3-220ENST00000496711 OR1G1P47890 313 aa13.3□□□□□ -0.28
GARNL3-220ENST00000496711 CSE1LP55060 971 aaKnown RBP13.3□□□□□ -0.28
GARNL3-220ENST00000496711 RPL10AP62906 217 aaKnown RBP13.3□□□□□ -0.28
GARNL3-220ENST00000496711 NRG1Q02297 640 aaPredicted RBP13.3□□□□□ -0.28
GARNL3-220ENST00000496711 PCLAFQ15004 111 aa13.3□□□□□ -0.28
GARNL3-220ENST00000496711 NFE2Q16621 373 aaPredicted RBP13.3□□□□□ -0.28
GARNL3-220ENST00000496711 TEDDM1Q5T9Z0 273 aa13.3□□□□□ -0.28
GARNL3-220ENST00000496711 ZCCHC23Q6ZST2 131 aa13.3□□□□□ -0.28
GARNL3-220ENST00000496711 OTOP3Q7RTS5 596 aa13.3□□□□□ -0.28
GARNL3-220ENST00000496711 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.3□□□□□ -0.28
GARNL3-220ENST00000496711 PTCD3Q96EY7 689 aaKnown RBP13.3□□□□□ -0.28
GARNL3-220ENST00000496711 PPP1R2P1Q96PQ5 205 aa13.3□□□□□ -0.28
GARNL3-220ENST00000496711 IL12RB2Q99665 862 aa13.3□□□□□ -0.28
GARNL3-220ENST00000496711 TBC1D10AQ9BXI6 508 aa13.3□□□□□ -0.28
GARNL3-220ENST00000496711 TRPV6Q9H1D0 765 aa13.3□□□□□ -0.28
GARNL3-220ENST00000496711 TBC1D13Q9NVG8 400 aa13.3□□□□□ -0.28
GARNL3-220ENST00000496711 THAP1Q9NVV9 213 aa13.3□□□□□ -0.28
GARNL3-220ENST00000496711 MAGED2Q9UNF1 606 aaPredicted RBP13.3□□□□□ -0.28
GARNL3-220ENST00000496711 SCML2Q9UQR0 700 aa13.3□□□□□ -0.28
GARNL3-220ENST00000496711 KCNU1A8MYU2 1149 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms