RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 IDI2Q9BXS1 227 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 TMEM117Q9H0C3 514 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 ILKAPQ9H0C8 392 aaPredicted RBP8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 IFT22Q9H7X7 185 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 FAM105AQ9NUU6 356 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 IL20Q9NYY1 176 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 MAT2BQ9NZL9 334 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 TYW5A2RUC4 315 aaKnown RBP8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 GSG1L2A8MUP6 293 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 HTRA2O43464 458 aaPredicted RBP8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 TDP2O95551 362 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 CYP1A2P05177 515 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 MERTKQ12866 999 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 GRB10Q13322 594 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 PMS2P3Q13401 168 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 SELPLGQ14242 412 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 SAMD4BQ5PRF9 694 aaKnown RBP8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 DARS2Q6PI48 645 aaKnown RBP8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 RHBDF2Q6PJF5 856 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 ZNF767PQ75MW2 155 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 BBS7Q8IWZ6 715 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 ATP6V1E2Q96A05 226 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 ACDQ96AP0 544 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 SIPA1Q96FS4 1042 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 METTL2AQ96IZ6 378 aaKnown RBP8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 CEP170P1Q96L14 293 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 ATP13A3Q9H7F0 1226 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 PARVAQ9NVD7 372 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 SRP68Q9UHB9 627 aaKnown RBP8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 BAIAP2Q9UQB8 552 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 CFL2Q9Y281 166 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 COMMD10Q9Y6G5 202 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 USP31Q70CQ4 1352 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 CLRN2A0PK11 232 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 A8MX80 341 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 AVILO75366 819 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 WBP4O75554 376 aaKnown RBP8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 CBX5P45973 191 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 HADHBP55084 474 aaKnown RBP8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 CDKL1Q00532 357 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 IGSF11Q5DX21 431 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 PTAR1Q7Z6K3 402 aaPredicted RBP8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 CHERPQ8IWX8 916 aaKnown RBP8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 C8orf59Q8N0T1 100 aaPredicted RBP8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 GIMAP1Q8WWP7 306 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 SLC7A3Q8WY07 619 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 RCN3Q96D15 328 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 EBF4Q9BQW3 602 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 MTMR12Q9C0I1 747 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 TOR3AQ9H497 397 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 RAPGEFL1Q9UHV5 662 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 MRPS7Q9Y2R9 242 aaKnown RBP8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 PLLPQ9Y342 182 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 PTTG1O95997 202 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 IL1BP01584 269 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 S100A6P06703 90 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 XRCC1P18887 633 aaPredicted RBP8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 GLRA2P23416 452 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 PRIM2P49643 509 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 IL1RL1Q01638 556 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 PUDPQ08623 228 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 TRAP1Q12931 704 aaKnown RBP8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 NFX1Q12986 1120 aaKnown RBP8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 CDK10Q15131 360 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 ANGPT1Q15389 498 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 SEL1L3Q68CR1 1132 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 EFL1Q7Z2Z2 1120 aaKnown RBP8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 RFX6Q8HWS3 928 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 CBR4Q8N4T8 237 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 LINC00469Q8N7U9 141 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 VGLL2Q8N8G2 317 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 CCDC120Q96HB5 630 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 MAP6Q96JE9 813 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 ANKRD60Q9BZ19 345 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 SLC6A15Q9H2J7 730 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 PNPLA8Q9NP80 782 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 DNAJC28Q9NX36 388 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 EIF3LQ9Y262 564 aaKnown RBP8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 USP17L12C9JPN9 530 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 USP17L21D6R901 530 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 E5RI56 91 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 PLK4O00444 970 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 HOXC11O43248 304 aaPredicted RBP8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 VAPBO95292 243 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 BPGMP07738 259 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 RPL17P18621 184 aaKnown RBP8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 PIK3R1P27986 724 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 ENPEPQ07075 957 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 SLC13A2Q13183 592 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 ZNF181Q2M3W8 571 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 SH3BP5LQ7L8J4 393 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 CDC26Q8NHZ8 85 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 MAGEE2Q8TD90 523 aaPredicted RBP8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 MSANTD3Q96H12 275 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 ZNF512Q96ME7 567 aaPredicted RBP8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 RANBP9Q96S59 729 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 NPLQ9BXD5 320 aaPredicted RBP8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 TRIM45Q9H8W5 580 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms