RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 ZNF618Q5T7W0 954 aa10.34□□□□□ -0.75
LINC00488-201ENST00000494582 FAM102BQ5T8I3 360 aa10.34□□□□□ -0.75
LINC00488-201ENST00000494582 PPP4R4Q6NUP7 873 aa10.34□□□□□ -0.75
LINC00488-201ENST00000494582 CMC1Q7Z7K0 106 aa10.34□□□□□ -0.75
LINC00488-201ENST00000494582 CBR4Q8N4T8 237 aa10.34□□□□□ -0.75
LINC00488-201ENST00000494582 TMCO5AQ8N6Q1 288 aa10.34□□□□□ -0.75
LINC00488-201ENST00000494582 PQLC3Q8N755 202 aa10.34□□□□□ -0.75
LINC00488-201ENST00000494582 DCAF4Q8WV16 495 aa10.34□□□□□ -0.75
LINC00488-201ENST00000494582 LPGAT1Q92604 370 aa10.34□□□□□ -0.75
LINC00488-201ENST00000494582 APBA2Q99767 749 aa10.34□□□□□ -0.75
LINC00488-201ENST00000494582 OSBPL10Q9BXB5 764 aa10.34□□□□□ -0.75
LINC00488-201ENST00000494582 PIH1D1Q9NWS0 290 aaKnown RBP10.34□□□□□ -0.75
LINC00488-201ENST00000494582 MOCS1Q9NZB8 636 aa10.34□□□□□ -0.75
LINC00488-201ENST00000494582 TCAF1Q9Y4C2 921 aa10.34□□□□□ -0.75
LINC00488-201ENST00000494582 PCDHGA3Q9Y5H0 932 aa10.34□□□□□ -0.75
LINC00488-201ENST00000494582 FER1L6Q2WGJ9 1857 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 KPNA4O00629 521 aaPredicted RBP10.33□□□□□ -0.76
LINC00488-201ENST00000494582 TRIM38O00635 465 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 AXIN1O15169 862 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 KCNN4O15554 427 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 B4GAT1O43505 415 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 CLPXO76031 633 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 HSPA4LO95757 839 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 HDCP19113 662 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 RBL1P28749 1068 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 HOXA10P31260 410 aaPredicted RBP10.33□□□□□ -0.76
LINC00488-201ENST00000494582 NR4A2P43354 598 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 GTF2IP78347 998 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 RHDQ02161 417 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 CBLBQ13191 982 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 PTK2BQ14289 1009 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 CARTPTQ16568 116 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 ZNF394Q53GI3 561 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 WDR44Q5JSH3 913 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 TTC30AQ86WT1 665 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 KCTD6Q8NC69 237 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 SLC7A3Q8WY07 619 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 ASB9Q96DX5 294 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 FEM1CQ96JP0 617 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 PEBP4Q96S96 227 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 UHRF1Q96T88 793 aaPredicted RBP10.33□□□□□ -0.76
LINC00488-201ENST00000494582 EBNA1BP2Q99848 306 aaKnown RBP10.33□□□□□ -0.76
LINC00488-201ENST00000494582 MTG1Q9BT17 334 aaPredicted RBP10.33□□□□□ -0.76
LINC00488-201ENST00000494582 FRMD8P1Q9BZ68 369 aaPredicted RBP10.33□□□□□ -0.76
LINC00488-201ENST00000494582 SDCBP2Q9H190 292 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 CCDC68Q9H2F9 335 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 FAM96AQ9H5X1 160 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 FAM149AA5PLN7 773 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 PRORSD1PA6NEY8 169 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 ZNF839A8K0R7 811 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 F5H423 210 aaPredicted RBP10.33□□□□□ -0.76
LINC00488-201ENST00000494582 G3V2L1 256 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 H7C0C1 242 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 METTL18O95568 372 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 CCNA2P20248 432 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 MAP4P27816 1152 aaKnown RBP10.33□□□□□ -0.76
LINC00488-201ENST00000494582 ATP5OP48047 213 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 SERPINB9P50453 376 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 CSE1LP55060 971 aaKnown RBP10.33□□□□□ -0.76
LINC00488-201ENST00000494582 ADAM17P78536 824 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 ART3Q13508 389 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 TRIM25Q14258 630 aaKnown RBP10.33□□□□□ -0.76
LINC00488-201ENST00000494582 AOC3Q16853 763 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 EML3Q32P44 896 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 AGAP7PQ5VUJ5 663 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 GK5Q6ZS86 529 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 REM2Q8IYK8 340 aaPredicted RBP10.33□□□□□ -0.76
LINC00488-201ENST00000494582 THNSL1Q8IYQ7 743 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 CLIP4Q8N3C7 705 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 ABHD11Q8NFV4 315 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 ADI1Q9BV57 179 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 TEKT3Q9BXF9 490 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 SMARCAD1Q9H4L7 1026 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 POLE4Q9NR33 117 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.33□□□□□ -0.76
LINC00488-201ENST00000494582 BCAP29Q9UHQ4 241 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 CYTH4Q9UIA0 394 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 PTBP2Q9UKA9 531 aaKnown RBP10.33□□□□□ -0.76
LINC00488-201ENST00000494582 CDY2AQ9Y6F7 541 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 CDY1Q9Y6F8 540 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 DGKBQ9Y6T7 804 aa10.33□□□□□ -0.76
LINC00488-201ENST00000494582 TCRBV3S1A0A5B6 114 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 KCNU1A8MYU2 1149 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 MSI1O43347 362 aaKnown RBP10.32□□□□□ -0.76
LINC00488-201ENST00000494582 GRID2O43424 1007 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 BCL10O95999 233 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 NDUFB10O96000 172 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 TNNI1P19237 187 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 TGM1P22735 817 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 GRSF1Q12849 480 aaKnown RBP eCLIP10.32□□□□□ -0.76
LINC00488-201ENST00000494582 NFIAQ12857 509 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 AQP6Q13520 282 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 C6orf10Q5SRN2 563 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 ZBTB41Q5SVQ8 909 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 SH3PXD2AQ5TCZ1 1133 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 FAM219BQ5XKK7 198 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 PPP2R2DQ66LE6 453 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 PIGZQ86VD9 579 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 LDHDQ86WU2 507 aa10.32□□□□□ -0.76
LINC00488-201ENST00000494582 HACE1Q8IYU2 909 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms