RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 HOXD9P28356 352 aaPredicted RBP6.39□□□□□ -1.39
SMG7-208ENST00000493609 TUBP50607 506 aa6.39□□□□□ -1.39
SMG7-208ENST00000493609 OAZ1P54368 228 aa6.39□□□□□ -1.39
SMG7-208ENST00000493609 ARHGAP8P85298 464 aa6.39□□□□□ -1.39
SMG7-208ENST00000493609 TRPC3Q13507 836 aa6.39□□□□□ -1.39
SMG7-208ENST00000493609 AP5B1Q2VPB7 878 aa6.39□□□□□ -1.39
SMG7-208ENST00000493609 KIAA1614Q5VZ46 1190 aa6.39□□□□□ -1.39
SMG7-208ENST00000493609 PAPD7Q5XG87 772 aaKnown RBP6.39□□□□□ -1.39
SMG7-208ENST00000493609 SYCE2Q6PIF2 218 aa6.39□□□□□ -1.39
SMG7-208ENST00000493609 GALNT7Q86SF2 657 aa6.39□□□□□ -1.39
SMG7-208ENST00000493609 BCAS4Q8TDM0 211 aa6.39□□□□□ -1.39
SMG7-208ENST00000493609 WIPF2Q8TF74 440 aaPredicted RBP6.39□□□□□ -1.39
SMG7-208ENST00000493609 PIMREGQ9BSJ6 248 aa6.39□□□□□ -1.39
SMG7-208ENST00000493609 FRMD8Q9BZ67 464 aaPredicted RBP6.39□□□□□ -1.39
SMG7-208ENST00000493609 GPR63Q9BZJ6 419 aa6.39□□□□□ -1.39
SMG7-208ENST00000493609 PRSS22Q9GZN4 317 aa6.39□□□□□ -1.39
SMG7-208ENST00000493609 IL21RQ9HBE5 538 aa6.39□□□□□ -1.39
SMG7-208ENST00000493609 Q9N2J8 555 aa6.39□□□□□ -1.39
SMG7-208ENST00000493609 CD207Q9UJ71 328 aa6.39□□□□□ -1.39
SMG7-208ENST00000493609 GDAQ9Y2T3 454 aa6.39□□□□□ -1.39
SMG7-208ENST00000493609 TOP2AP11388 1531 aaKnown RBP6.39□□□□□ -1.39
SMG7-208ENST00000493609 ADAM10O14672 748 aa6.38□□□□□ -1.39
SMG7-208ENST00000493609 MSI1O43347 362 aaKnown RBP6.38□□□□□ -1.39
SMG7-208ENST00000493609 METTL18O95568 372 aa6.38□□□□□ -1.39
SMG7-208ENST00000493609 KELP23276 732 aa6.38□□□□□ -1.39
SMG7-208ENST00000493609 GALNT3Q14435 633 aa6.38□□□□□ -1.39
SMG7-208ENST00000493609 SRSF7Q16629 238 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMG7-208ENST00000493609 WDR45BQ5MNZ6 344 aa6.38□□□□□ -1.39
SMG7-208ENST00000493609 FAM57BQ71RH2 274 aa6.38□□□□□ -1.39
SMG7-208ENST00000493609 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.38□□□□□ -1.39
SMG7-208ENST00000493609 HEATR4Q86WZ0 1026 aa6.38□□□□□ -1.39
SMG7-208ENST00000493609 HTRA1Q92743 480 aa6.38□□□□□ -1.39
SMG7-208ENST00000493609 HVCN1Q96D96 273 aa6.38□□□□□ -1.39
SMG7-208ENST00000493609 PGAP2Q9UHJ9 254 aa6.38□□□□□ -1.39
SMG7-208ENST00000493609 UTS2RQ9UKP6 389 aa6.38□□□□□ -1.39
SMG7-208ENST00000493609 HSF4Q9ULV5 492 aa6.38□□□□□ -1.39
SMG7-208ENST00000493609 AFG3L2Q9Y4W6 797 aa6.38□□□□□ -1.39
SMG7-208ENST00000493609 C17orf100A8MU93 164 aa6.37□□□□□ -1.39
SMG7-208ENST00000493609 CCNT1O60563 726 aaKnown RBP6.37□□□□□ -1.39
SMG7-208ENST00000493609 WNT1P04628 370 aa6.37□□□□□ -1.39
SMG7-208ENST00000493609 CTSAP10619 480 aa6.37□□□□□ -1.39
SMG7-208ENST00000493609 CYP19A1P11511 503 aaPredicted RBP6.37□□□□□ -1.39
SMG7-208ENST00000493609 RPS13P62277 151 aaKnown RBP6.37□□□□□ -1.39
SMG7-208ENST00000493609 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.37□□□□□ -1.39
SMG7-208ENST00000493609 GOLGA8FQ08AF8 430 aa6.37□□□□□ -1.39
SMG7-208ENST00000493609 BYSLQ13895 437 aaKnown RBP6.37□□□□□ -1.39
SMG7-208ENST00000493609 IL13RA2Q14627 380 aa6.37□□□□□ -1.39
SMG7-208ENST00000493609 DPY19L2P1Q6NXN4 242 aa6.37□□□□□ -1.39
SMG7-208ENST00000493609 LRIG3Q6UXM1 1119 aa6.37□□□□□ -1.39
SMG7-208ENST00000493609 UBE2Q1Q7Z7E8 422 aa6.37□□□□□ -1.39
SMG7-208ENST00000493609 IL17REQ8NFR9 667 aa6.37□□□□□ -1.39
SMG7-208ENST00000493609 AAMDCQ9H7C9 122 aa6.37□□□□□ -1.39
SMG7-208ENST00000493609 ZNF304Q9HCX3 659 aa6.37□□□□□ -1.39
SMG7-208ENST00000493609 TMEM45AQ9NWC5 275 aa6.37□□□□□ -1.39
SMG7-208ENST00000493609 HDAC6Q9UBN7 1215 aa6.37□□□□□ -1.39
SMG7-208ENST00000493609 UPB1Q9UBR1 384 aa6.37□□□□□ -1.39
SMG7-208ENST00000493609 A0A1B0GVC2 190 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 E5RJQ4 531 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 FCGR2AP12318 317 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 CD72P21854 359 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 CIITAP33076 1130 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 HNF1BP35680 557 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 C21orf58P58505 322 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 MAPK7Q13164 816 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 TDGQ13569 410 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 Q4G0T1 1027 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 MIDNQ504T8 468 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 MTX3Q5HYI7 312 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 ZNF626Q68DY1 528 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 NAPEPLDQ6IQ20 393 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 CYB5R4Q7L1T6 521 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 SRRM1Q8IYB3 904 aaKnown RBP6.36□□□□□ -1.39
SMG7-208ENST00000493609 CUL5Q93034 780 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 PHF7Q9BWX1 381 aaPredicted RBP6.36□□□□□ -1.39
SMG7-208ENST00000493609 CADM1Q9BY67 442 aaKnown RBP6.36□□□□□ -1.39
SMG7-208ENST00000493609 TAOK3Q9H2K8 898 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 MROH8Q9H579 483 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 WASH6PQ9NQA3 447 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 LAMP3Q9UQV4 416 aa6.36□□□□□ -1.39
SMG7-208ENST00000493609 DPPA5A6NC42 116 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 FAM90A7PA6NKC0 464 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 SH2D7A6NKC9 451 aaPredicted RBP6.35□□□□□ -1.39
SMG7-208ENST00000493609 FAM90A22PA8MWA6 464 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 FAM90A12PA8MX19 464 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 FAM90A23PA8MXZ1 464 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 RHODO00212 210 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 NEURL1O76050 574 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 HNRNPA1P09651 372 aaKnown RBP eCLIP6.35□□□□□ -1.39
SMG7-208ENST00000493609 XBP1P17861 261 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 PRKCHP24723 683 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 KLRC2P26717 231 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 CHRNA5P30532 468 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 PGM1P36871 562 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 STAT1P42224 750 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 MTNR1AP48039 350 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 ID2Q02363 134 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 POU5F1BQ06416 359 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 UBAP2Q5T6F2 1119 aaKnown RBP6.35□□□□□ -1.39
SMG7-208ENST00000493609 CCDC70Q6NSX1 233 aa6.35□□□□□ -1.39
SMG7-208ENST00000493609 RETSATQ6NUM9 610 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms