RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 LONP2Q86WA8 852 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 LRRC8AQ8IWT6 810 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 RHOT1Q8IXI2 618 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 ZNF687Q8N1G0 1237 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 LZTR1Q8N653 840 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 RTL3Q8N8U3 475 aaKnown RBP8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 ATP11CQ8NB49 1132 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 ACRBPQ8NEB7 543 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 WFDC5Q8TCV5 224 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 HMGB4Q8WW32 186 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 SORCS1Q8WY21 1168 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 TTC17Q96AE7 1141 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 ZNF830Q96NB3 372 aaPredicted RBP8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 KCTD15Q96SI1 283 aaPredicted RBP8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 FEM1AQ9BSK4 669 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 ZDHHC4Q9NPG8 344 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 PRMT8Q9NR22 394 aaPredicted RBP8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 HAUS2Q9NVX0 235 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 TMEM248Q9NWD8 314 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 ZSCAN32Q9NX65 697 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 NENFQ9UMX5 172 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 ERVW-1Q9UQF0 538 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 TBC1D30Q9Y2I9 924 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 STON1Q9Y6Q2 735 aa8.34□□□□□ -1.07
TM4SF1-204ENST00000493348 SPAG17Q6Q759 2223 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 EDDM13A0A1B0GTR0 161 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 MACROD2A1Z1Q3 448 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 LRRD1A4D1F6 860 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 FAM72CH0Y354 149 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 SGK1O00141 431 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 DFFAO00273 331 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 AXIN1O15169 862 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 BNIP3LO60238 219 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 MTA2O94776 668 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 PAPSS2O95340 614 aaPredicted RBP8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 KRT1P04264 644 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 SP9P0CG40 484 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 RARAP10276 462 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 GOT1P17174 413 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 MZF1P28698 734 aaPredicted RBP8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 CNR2P34972 360 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 IL12RB1P42701 662 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 HCAR3P49019 387 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 NUMBP49757 651 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 DNA2P51530 1060 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 PLK1P53350 603 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 YBEYP58557 167 aaPredicted RBP8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 SLC20A2Q08357 652 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 MESP2Q0VG99 397 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 DPYSL2Q16555 572 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 PARP15Q460N3 678 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 TTC31Q49AM3 519 aaPredicted RBP8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 FAM72AQ5TYM5 149 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 DAB2IPQ5VWQ8 1189 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 RNF43Q68DV7 783 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 FAM72DQ6L9T8 149 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 TSSK4Q6SA08 328 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 POLNQ7Z5Q5 900 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 KIAA0907Q7Z7F0 614 aaPredicted RBP8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 C11orf74Q86VG3 221 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 FAM72BQ86X60 149 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 CCDC50Q8IVM0 306 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 SFTPA1Q8IWL2 248 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 APCDD1Q8J025 514 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 BBS5Q8N3I7 341 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 PAF1Q8N7H5 531 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 DCAF4L2Q8NA75 395 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 KDM1BQ8NB78 822 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 KIAA1524Q8TCG1 905 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 GANCQ8TET4 914 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 PRCCQ92733 491 aaPredicted RBP8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 MYEOVQ96EZ4 313 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 RPL10LQ96L21 214 aaKnown RBP8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 ALS2CR12Q96Q35 445 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 PEBP4Q96S96 227 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 GABRG3Q99928 467 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 DESI2Q9BSY9 194 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 SP110Q9HB58 689 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 ANLNQ9NQW6 1124 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 RCOR3Q9P2K3 495 aaPredicted RBP8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 AMFRQ9UKV5 643 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 NCKAP1Q9Y2A7 1128 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 PCDHGA2Q9Y5H1 932 aa8.33□□□□□ -1.08
TM4SF1-204ENST00000493348 CKAP5Q14008 2032 aa8.32□□□□□ -1.08
TM4SF1-204ENST00000493348 CCDC163A0A0D9SF12 145 aa8.32□□□□□ -1.08
TM4SF1-204ENST00000493348 TARSL2A2RTX5 802 aaKnown RBP8.32□□□□□ -1.08
TM4SF1-204ENST00000493348 BTNL10A8MVZ5 291 aa8.32□□□□□ -1.08
TM4SF1-204ENST00000493348 WASH4PA8MWX3 477 aa8.32□□□□□ -1.08
TM4SF1-204ENST00000493348 RASA4BC9J798 803 aa8.32□□□□□ -1.08
TM4SF1-204ENST00000493348 I6L893 689 aaPredicted RBP8.32□□□□□ -1.08
TM4SF1-204ENST00000493348 RASA4O43374 803 aa8.32□□□□□ -1.08
TM4SF1-204ENST00000493348 PSTPIP1O43586 416 aa8.32□□□□□ -1.08
TM4SF1-204ENST00000493348 NDUFS2O75306 463 aa8.32□□□□□ -1.08
TM4SF1-204ENST00000493348 ZNF217O75362 1048 aa8.32□□□□□ -1.08
TM4SF1-204ENST00000493348 DNTTP04053 509 aa8.32□□□□□ -1.08
TM4SF1-204ENST00000493348 HLA-EP13747 358 aa8.32□□□□□ -1.08
TM4SF1-204ENST00000493348 ZFXP17010 805 aaPredicted RBP8.32□□□□□ -1.08
TM4SF1-204ENST00000493348 ERCC2P18074 760 aa8.32□□□□□ -1.08
TM4SF1-204ENST00000493348 COMTP21964 271 aa8.32□□□□□ -1.08
TM4SF1-204ENST00000493348 HOXC13P31276 330 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms