RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 MRGPRX3Q96LB0 322 aa13.6□□□□□ -0.23
HDAC3-213ENST00000492506 HEXIM2Q96MH2 286 aaKnown RBP13.6□□□□□ -0.23
HDAC3-213ENST00000492506 ULBP1Q9BZM6 244 aa13.6□□□□□ -0.23
HDAC3-213ENST00000492506 NEUROG2Q9H2A3 272 aa13.6□□□□□ -0.23
HDAC3-213ENST00000492506 ADAMTS1Q9UHI8 967 aa13.6□□□□□ -0.23
HDAC3-213ENST00000492506 HECTD1Q9ULT8 2610 aa13.6□□□□□ -0.23
HDAC3-213ENST00000492506 SCML1Q9UN30 329 aa13.6□□□□□ -0.23
HDAC3-213ENST00000492506 NCKAP1Q9Y2A7 1128 aa13.6□□□□□ -0.23
HDAC3-213ENST00000492506 MAPK13O15264 365 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 MID1O15344 667 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 STX10O60499 249 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 SIN3BO75182 1162 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 KIAA0754O94854 1291 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 YEATS4O95619 227 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 LATS1O95835 1130 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 ATP5BP06576 529 aaKnown RBP13.59□□□□□ -0.23
HDAC3-213ENST00000492506 CD38P28907 300 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 RXRGP48443 463 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 CFHR1Q03591 330 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 BNIP3Q12983 259 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 ILKQ13418 452 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 ARID5BQ14865 1188 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 WHAMMP3Q1A5X7 153 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 MPP7Q5T2T1 576 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 WDR93Q6P2C0 686 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 TAX1BP1Q86VP1 789 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 ERICH1Q86X53 443 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 AOPEPQ8N6M6 819 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 ANKRD52Q8NB46 1076 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 TTC17Q96AE7 1141 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 TMEM176AQ96HP8 235 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 IMPG2Q9BZV3 1241 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 RCOR1Q9UKL0 485 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 INTS6Q9UL03 887 aaKnown RBP13.59□□□□□ -0.23
HDAC3-213ENST00000492506 PIEZO2Q9H5I5 2752 aa13.59□□□□□ -0.23
HDAC3-213ENST00000492506 A0A1W2PP55 124 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 A0A1W2PQ27 194 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 A0A1W2PQ64 194 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 YJEFN3A6XGL0 299 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 E7ENQ6 273 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 CAPN9O14815 690 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 YKT6O15498 198 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 MSI1O43347 362 aaKnown RBP13.58□□□□□ -0.24
HDAC3-213ENST00000492506 PRR29P0C7W0 189 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 POLR2EP19388 210 aaKnown RBP13.58□□□□□ -0.24
HDAC3-213ENST00000492506 SLC6A4P31645 630 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 CCR5P51681 352 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 NXPH1P58417 271 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 MCCD1P59942 119 aaPredicted RBP13.58□□□□□ -0.24
HDAC3-213ENST00000492506 INSM1Q01101 510 aaPredicted RBP13.58□□□□□ -0.24
HDAC3-213ENST00000492506 CST6Q15828 149 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 HNRNPA1L2Q32P51 320 aaKnown RBP13.58□□□□□ -0.24
HDAC3-213ENST00000492506 TBC1D25Q3MII6 688 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 FAM133BQ5BKY9 247 aaKnown RBP13.58□□□□□ -0.24
HDAC3-213ENST00000492506 C9orf64Q5T6V5 341 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 PIK3R6Q5UE93 754 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 BSPRYQ5W0U4 402 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 YTHDF3Q7Z739 585 aaKnown RBP13.58□□□□□ -0.24
HDAC3-213ENST00000492506 SPACA3Q8IXA5 215 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 DCBLD1Q8N8Z6 715 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 LRRN4CLQ8ND94 238 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 OR2T34Q8NGX1 318 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 EDEM1Q92611 657 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 SEMA4DQ92854 862 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 SKA1Q96BD8 255 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 NAA15Q9BXJ9 866 aaKnown RBP13.58□□□□□ -0.24
HDAC3-213ENST00000492506 ERVMER34-1Q9H9K5 563 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 GDF3Q9NR23 364 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 CISHQ9NSE2 258 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 OLA1Q9NTK5 396 aaKnown RBP13.58□□□□□ -0.24
HDAC3-213ENST00000492506 MYO1AQ9UBC5 1043 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 MCM8Q9UJA3 840 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 FZD4Q9ULV1 537 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 TRAF3IP3Q9Y228 551 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 FRMD4BQ9Y2L6 1034 aa13.58□□□□□ -0.24
HDAC3-213ENST00000492506 COL27A1Q8IZC6 1860 aaPredicted RBP13.57□□□□□ -0.24
HDAC3-213ENST00000492506 GOLGA6L7A0A1B0GV03 622 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 TTC36A6NLP5 189 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 J3QKU1 62 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 TLR4O00206 839 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 TBL1XO60907 577 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 IGLV3-27P01718 113 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 CKMT2P17540 419 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 ARRB1P49407 418 aaPredicted RBP13.57□□□□□ -0.24
HDAC3-213ENST00000492506 GNG11P61952 73 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 CXADRP78310 365 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 RESP18Q5W5W9 173 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 RFWD3Q6PCD5 774 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 KIAA1328Q86T90 577 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 AADATQ8N5Z0 425 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 GANCQ8TET4 914 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 MYEOVQ96EZ4 313 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 FAM129BQ96TA1 746 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 IRX2Q9BZI1 471 aaPredicted RBP13.57□□□□□ -0.24
HDAC3-213ENST00000492506 XPO4Q9C0E2 1151 aaKnown RBP13.57□□□□□ -0.24
HDAC3-213ENST00000492506 BATF3Q9NR55 127 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 AASDHPPTQ9NRN7 309 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 CDC23Q9UJX2 597 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 CLCA2Q9UQC9 943 aa13.57□□□□□ -0.24
HDAC3-213ENST00000492506 PPP2R2CQ9Y2T4 447 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms