RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 HOXD12P35452 270 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 METAP1P53582 386 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 CDH4P55283 916 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 SLC12A1Q13621 1099 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 ARID5BQ14865 1188 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 E4F1Q66K89 784 aaPredicted RBP12.12□□□□□ -0.47
MDC1-207ENST00000492462 SND1Q7KZF4 910 aaKnown RBP eCLIP12.12□□□□□ -0.47
MDC1-207ENST00000492462 ARCQ7LC44 396 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 IRF2BP2Q7Z5L9 587 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 TFAP2DQ7Z6R9 452 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 PHF13Q86YI8 300 aaPredicted RBP12.12□□□□□ -0.47
MDC1-207ENST00000492462 MMAAQ8IVH4 418 aaKnown RBP12.12□□□□□ -0.47
MDC1-207ENST00000492462 KDM1BQ8NB78 822 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 CADM4Q8NFZ8 388 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 DNASE2BQ8WZ79 361 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 FOXJ1Q92949 421 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 PSMB7Q99436 277 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 SYT11Q9BT88 431 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 GTPBP2Q9BX10 602 aaKnown RBP12.12□□□□□ -0.47
MDC1-207ENST00000492462 MIR1-1HGQ9H1L0 117 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 PABPC3Q9H361 631 aaKnown RBP12.12□□□□□ -0.47
MDC1-207ENST00000492462 FBRSQ9HAH7 460 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 ADAM22Q9P0K1 906 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 EIF2B4Q9UI10 523 aaKnown RBP12.12□□□□□ -0.47
MDC1-207ENST00000492462 TBC1D30Q9Y2I9 924 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 DOCK9Q9BZ29 2069 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 IGF2RP11717 2491 aa12.12□□□□□ -0.47
MDC1-207ENST00000492462 CABIN1Q9Y6J0 2220 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 PLXNA2O75051 1894 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 IGLV3-10A0A075B6K4 115 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 A0A0D9SEW6 157 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 EDDM13A0A1B0GTR0 161 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 A0A1W2PP55 124 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 TCRBV5S1A1TA0A578 114 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 TARSL2A2RTX5 802 aaKnown RBP12.11□□□□□ -0.47
MDC1-207ENST00000492462 C2CD4BA6NLJ0 364 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 SMTNL1A8MU46 457 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 E9PAM4 449 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 MID1O15344 667 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 SRGAP2O75044 1071 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 SEMA4FO95754 770 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 MT-CO1P00395 513 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 DPP6P42658 865 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 NSFP46459 744 aaKnown RBP12.11□□□□□ -0.47
MDC1-207ENST00000492462 PSMD8P48556 350 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 BNC1Q01954 994 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 GFPT1Q06210 699 aaPredicted RBP12.11□□□□□ -0.47
MDC1-207ENST00000492462 CST6Q15828 149 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 WDR45BQ5MNZ6 344 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 SYCP2LQ5T4T6 812 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 N4BP2L1Q5TBK1 243 aaPredicted RBP12.11□□□□□ -0.47
MDC1-207ENST00000492462 MON1BQ7L1V2 547 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 DNAAF5Q86Y56 855 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 C1orf216Q8TAB5 229 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 CEP76Q8TAP6 659 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 GANCQ8TET4 914 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 FRS2Q8WU20 508 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 C1orf74Q96LT6 269 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 CBX8Q9HC52 389 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 FBXL12Q9NXK8 326 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 TAS2R14Q9NYV8 317 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 ZNF212Q9UDV6 495 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 VPS28Q9UK41 221 aa12.11□□□□□ -0.47
MDC1-207ENST00000492462 TMEM131Q92545 1883 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 DSPP15924 2871 aaKnown RBP12.1□□□□□ -0.47
MDC1-207ENST00000492462 A0A1B0GTH6 734 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 LRRC53A6NM62 1247 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 FAM72CH0Y354 149 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 K7ERQ8 282 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 PLK4O00444 970 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 ARHGAP33O14559 1287 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 RHOCP08134 193 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 KRT3P12035 628 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 FERP16591 822 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 GLDCP23378 1020 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 SDC4P31431 198 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 SLC8A1P32418 973 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 ADRA1BP35368 520 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 PTPN9P43378 593 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 HDAC4P56524 1084 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 ZBTB16Q05516 673 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 SULT2A1Q06520 285 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 MTA1Q13330 715 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 KLHL40Q2TBA0 621 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 TTC31Q49AM3 519 aaPredicted RBP12.1□□□□□ -0.47
MDC1-207ENST00000492462 FAM72AQ5TYM5 149 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 DAB2IPQ5VWQ8 1189 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 FAM72DQ6L9T8 149 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 PSAPL1Q6NUJ1 521 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 WDR59Q6PJI9 974 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 LINGO4Q6UY18 593 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 Q6ZVU0 165 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 LUZP1Q86V48 1076 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 FAM72BQ86X60 149 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 MINDY1Q8N5J2 469 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 AADATQ8N5Z0 425 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 CCDC185Q8N715 623 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 C3orf20Q8ND61 904 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 DEFB124Q8NES8 71 aa12.1□□□□□ -0.47
MDC1-207ENST00000492462 OR7D4Q8NG98 312 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms