RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 TRIM38O00635 465 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 XPO1O14980 1071 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 MSI1O43347 362 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 TBL1XO60907 577 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 SIN3BO75182 1162 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 NR2F2P24468 414 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 ME1P48163 572 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 KCNAB2Q13303 367 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 GOLGA7BQ2TAP0 167 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 HNRNPA1L2Q32P51 320 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 PIK3R6Q5UE93 754 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 FOXD4L5Q5VV16 416 aaPredicted RBP12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 BSPRYQ5W0U4 402 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 RFWD3Q6PCD5 774 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 FAM186BQ8IYM0 893 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 TTC39CQ8N584 583 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 CCDC150Q8NCX0 1101 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 GANCQ8TET4 914 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 RNF139Q8WU17 664 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 FOXD4L4Q8WXT5 416 aaPredicted RBP12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 TATDN2Q93075 761 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 FAXDC2Q96IV6 333 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 MRGPRX3Q96LB0 322 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 NEUROG2Q9H2A3 272 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 INTS6Q9UL03 887 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 SCML1Q9UN30 329 aa12.12□□□□□ -0.47
CACNA1C-228ENST00000492150 A0A1W2PP55 124 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 A1L4Q6 167 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 MID1O15344 667 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 IGLV3-27P01718 113 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 THEGLP0DJG4 465 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 KRT13P13646 458 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 SLC6A4P31645 630 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 PSMC2P35998 433 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 SLC8A3P57103 927 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 ADIGQ0VDE8 80 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 CST6Q15828 149 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 FAM133BQ5BKY9 247 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 MPP7Q5T2T1 576 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 C9orf64Q5T6V5 341 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 KRT39Q6A163 491 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 MSANTD2Q6P1R3 559 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 OR2T34Q8NGX1 318 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 OR4C6Q8NH72 309 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 WDR36Q8NI36 951 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 HTR3CQ8WXA8 447 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 MYEOVQ96EZ4 313 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 ATXN7L3BQ96GX2 97 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 USP29Q9HBJ7 922 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 LRRC4Q9HBW1 653 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 AASDHPPTQ9NRN7 309 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 ABCC13Q9NSE7 274 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 TSPAN16Q9UKR8 245 aa12.11□□□□□ -0.47
CACNA1C-228ENST00000492150 ESPL1Q14674 2120 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 APCP25054 2843 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 LRRC72A6NJI9 287 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 RNASEH2AO75792 299 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 GABBR2O75899 941 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 TNFSF15O95150 251 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 RNF224P0DH78 156 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 LIPCP11150 499 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 COL8A1P27658 744 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 GTF2H1P32780 548 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 CSKP41240 450 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 CCR5P51681 352 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 DAOAP59103 153 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 BST2Q10589 180 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 SRSF6Q13247 344 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 ARID5BQ14865 1188 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 HS1BP3Q53T59 392 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 NADSYN1Q6IA69 706 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 CAPRIN2Q6IMN6 1127 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 C14orf80Q86SX3 495 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 MMAAQ8IVH4 418 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 SCML4Q8N228 414 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 FIBINQ8TAL6 211 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 UBA3Q8TBC4 463 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 IPO9Q96P70 1041 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 FAM129BQ96TA1 746 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 IRX2Q9BZI1 471 aaPredicted RBP12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 ABCG4Q9H172 646 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 RAB20Q9NX57 234 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 STIM2Q9P246 746 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 FZD4Q9ULV1 537 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 TPX2Q9ULW0 747 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 MAPK8IP1Q9UQF2 711 aa12.1□□□□□ -0.47
CACNA1C-228ENST00000492150 HIVEP3Q5T1R4 2406 aa12.09□□□□□ -0.47
CACNA1C-228ENST00000492150 TTC34A8MYJ7 566 aa12.09□□□□□ -0.47
CACNA1C-228ENST00000492150 K7ELQ4 463 aaPredicted RBP12.09□□□□□ -0.47
CACNA1C-228ENST00000492150 TLR4O00206 839 aa12.09□□□□□ -0.47
CACNA1C-228ENST00000492150 IRAK2O43187 625 aa12.09□□□□□ -0.47
CACNA1C-228ENST00000492150 ACSL4O60488 711 aa12.09□□□□□ -0.47
CACNA1C-228ENST00000492150 RNASEH1O60930 286 aaKnown RBP12.09□□□□□ -0.47
CACNA1C-228ENST00000492150 ASLP04424 464 aa12.09□□□□□ -0.47
CACNA1C-228ENST00000492150 SLC8A1P32418 973 aa12.09□□□□□ -0.47
CACNA1C-228ENST00000492150 CTSOP43234 321 aaPredicted RBP12.09□□□□□ -0.47
CACNA1C-228ENST00000492150 MXI1P50539 228 aa12.09□□□□□ -0.47
CACNA1C-228ENST00000492150 POLE2P56282 527 aa12.09□□□□□ -0.47
CACNA1C-228ENST00000492150 ST8SIA6P61647 398 aa12.09□□□□□ -0.47
CACNA1C-228ENST00000492150 SFSWAPQ12872 951 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms