RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 LDHAP00338 332 aaKnown RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 IL1BP01584 269 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 KRT18P05783 430 aaKnown RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 PYGLP06737 847 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 GNA11P29992 359 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 CDC25CP30307 473 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 FOXN2P32314 431 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 PCK1P35558 622 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 VHLP40337 213 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 STAT3P40763 770 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 PTDSS1P48651 473 aaKnown RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 RAD23BP54727 409 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 RNASE9P60153 205 aaKnown RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 RPL26P61254 145 aaKnown RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 FKBP1AP62942 108 aaKnown RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 SP4Q02446 784 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 CAV1Q03135 178 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 SPP2Q13103 211 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 SNX1Q13596 522 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 HNRNPDQ14103 355 aaKnown RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 KIF22Q14807 665 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 KPNB1Q14974 876 aaKnown RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 TNIP1Q15025 636 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 ZRSR2Q15696 482 aaKnown RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 CCDC142Q17RM4 750 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 KRTAP15-1Q3LI76 137 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 BRDTQ58F21 947 aaPredicted RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 SLC45A4Q5BKX6 768 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 UBAP2Q5T6F2 1119 aaKnown RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 TTC27Q6P3X3 843 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 USP17L6PQ6QN14 398 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 C4orf50Q6ZRC1 276 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 FAM43BQ6ZT52 329 aaPredicted RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 TRMT1LQ7Z2T5 733 aaKnown RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 KCNK18Q7Z418 384 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 ADGRG6Q86SQ4 1221 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 DAAM2Q86T65 1068 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 MTDHQ86UE4 582 aaKnown RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 VPS36Q86VN1 386 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 LCA5Q86VQ0 697 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 GLCCI1Q86VQ1 547 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 TDRPQ86YL5 185 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 RASAL3Q86YV0 1011 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 WDR75Q8IWA0 830 aaKnown RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 RHOT2Q8IXI1 618 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 KBTBD2Q8IY47 623 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 ADGRF4Q8IZF3 695 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 ZNF444Q8N0Y2 327 aaPredicted RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 RIBC1Q8N443 379 aaPredicted RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 DNAJC5GQ8N7S2 189 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 AGBL3Q8NEM8 1001 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 LNX1Q8TBB1 728 aaPredicted RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 UCMAQ8WVF2 138 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 SCFD1Q8WVM8 642 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 C10orf82Q8WW14 230 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 CFHR4Q92496 578 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 GLG1Q92896 1179 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 ARHGEF2Q92974 986 aaKnown RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 SLC35C1Q96A29 364 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 PPP1R14BQ96C90 147 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 FOXRED1Q96CU9 486 aaPredicted RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 OPTNQ96CV9 577 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 ERP27Q96DN0 273 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 SLC39A13Q96H72 371 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 PLEKHG4BQ96PX9 1271 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 CDC6Q99741 560 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 ZSWIM1Q9BR11 485 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 SH2D3AQ9BRG2 576 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 YIPF4Q9BSR8 244 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 FAM167BQ9BTA0 163 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 IDI2Q9BXS1 227 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 TRIM4Q9C037 500 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 ARHGAP39Q9C0H5 1083 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 MYLK2Q9H1R3 596 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 DHX36Q9H2U1 1008 aaKnown RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 GOLPH3Q9H4A6 298 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 DENND2DQ9H6A0 471 aaPredicted RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 LRRC19Q9H756 370 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 DCLRE1BQ9H816 532 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 JMJD4Q9H9V9 463 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 PPCSQ9HAB8 311 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 C17orf75Q9HAS0 396 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 ERVK-5Q9HDB9 667 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 TXNRD2Q9NNW7 524 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 UBN1Q9NPG3 1134 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 IRAK4Q9NWZ3 460 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 CHCHD3Q9NX63 227 aaKnown RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 MTMR4Q9NYA4 1195 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 IL1RAPL1Q9NZN1 696 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 ATXN10Q9UBB4 475 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 DNAJB4Q9UDY4 337 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 ARMCX3Q9UH62 379 aaPredicted RBP3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 CIDEBQ9UHD4 219 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 SCOCQ9UIL1 159 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 AMFRQ9UKV5 643 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 CHKBQ9Y259 395 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 COQ6Q9Y2Z9 468 aa3.6□□□□□ -1.83
CRNKL1-203ENST00000490258 NEU2Q9Y3R4 380 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms