RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 KATNAL2Q8IYT4 538 aa17.16■□□□□ 0.34
SFXN5-220ENST00000490056 CCDC33Q8N5R6 958 aa17.16■□□□□ 0.34
SFXN5-220ENST00000490056 ALLCQ8N6M5 410 aa17.16■□□□□ 0.34
SFXN5-220ENST00000490056 NPWQ8N729 165 aa17.16■□□□□ 0.34
SFXN5-220ENST00000490056 ZNF513Q8N8E2 541 aaPredicted RBP17.16■□□□□ 0.34
SFXN5-220ENST00000490056 TMEM105Q8N8V8 129 aa17.16■□□□□ 0.34
SFXN5-220ENST00000490056 RPLP0P6Q8NHW5 317 aa17.16■□□□□ 0.34
SFXN5-220ENST00000490056 ALG3Q92685 438 aa17.16■□□□□ 0.34
SFXN5-220ENST00000490056 TTC17Q96AE7 1141 aa17.16■□□□□ 0.34
SFXN5-220ENST00000490056 ZNF670Q9BS34 389 aa17.16■□□□□ 0.34
SFXN5-220ENST00000490056 POLR3BQ9NW08 1133 aaPredicted RBP17.16■□□□□ 0.34
SFXN5-220ENST00000490056 RCOR3Q9P2K3 495 aaPredicted RBP17.16■□□□□ 0.34
SFXN5-220ENST00000490056 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.16■□□□□ 0.34
SFXN5-220ENST00000490056 STARD13Q9Y3M8 1113 aa17.16■□□□□ 0.34
SFXN5-220ENST00000490056 ZDBF2Q9HCK1 2354 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 CCDC66A2RUB6 948 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 RASA4BC9J798 803 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 DDX3YO15523 660 aaKnown RBP17.15■□□□□ 0.34
SFXN5-220ENST00000490056 RASA4O43374 803 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 TIMM44O43615 452 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 GPR37L1O60883 481 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 RAMP2O60895 175 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 ZRANB2O95218 330 aaKnown RBP eCLIP17.15■□□□□ 0.34
SFXN5-220ENST00000490056 KLF8O95600 359 aaPredicted RBP17.15■□□□□ 0.34
SFXN5-220ENST00000490056 GLDCP23378 1020 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 RPS9P46781 194 aaKnown RBP17.15■□□□□ 0.34
SFXN5-220ENST00000490056 POLD3Q15054 466 aaPredicted RBP17.15■□□□□ 0.34
SFXN5-220ENST00000490056 EIF4HQ15056 248 aaKnown RBP17.15■□□□□ 0.34
SFXN5-220ENST00000490056 UMODL1-AS1Q8N2C9 162 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 C17orf53Q8N3J3 647 aaPredicted RBP17.15■□□□□ 0.34
SFXN5-220ENST00000490056 SYNPOQ8N3V7 929 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 PQLC3Q8N755 202 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 IL17RCQ8NAC3 791 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 UCMAQ8WVF2 138 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 ARHGEF2Q92974 986 aaKnown RBP17.15■□□□□ 0.34
SFXN5-220ENST00000490056 FAF2Q96CS3 445 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 RPL10LQ96L21 214 aaKnown RBP17.15■□□□□ 0.34
SFXN5-220ENST00000490056 RNF157Q96PX1 679 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 ALS2CR12Q96Q35 445 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 SLC39A8Q9C0K1 460 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 MAGEH1Q9H213 219 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 CHRDQ9H2X0 955 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 C2orf42Q9NWW7 574 aa17.15■□□□□ 0.34
SFXN5-220ENST00000490056 WASH3PC4AMC7 463 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 ATP5BP06576 529 aaKnown RBP17.14■□□□□ 0.33
SFXN5-220ENST00000490056 DLDP09622 509 aaKnown RBP17.14■□□□□ 0.33
SFXN5-220ENST00000490056 KRT10P13645 584 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 HNRNPLP14866 589 aaKnown RBP eCLIP17.14■□□□□ 0.33
SFXN5-220ENST00000490056 CDKN2BP42772 138 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 STK19P49842 368 aaPredicted RBP17.14■□□□□ 0.33
SFXN5-220ENST00000490056 RWDD2BP57060 319 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 MRPS21P82921 87 aaKnown RBP17.14■□□□□ 0.33
SFXN5-220ENST00000490056 ZNF234Q14588 700 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 PTPRNQ16849 979 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 TMEM31Q5JXX7 168 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 IL31Q6EBC2 164 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 AADACL2Q6P093 401 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 TMCO3Q6UWJ1 677 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 ZNF783Q6ZMS7 281 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 SPOCD1Q6ZMY3 1216 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 CCDC50Q8IVM0 306 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 ARHGAP12Q8IWW6 846 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 RCOR2Q8IZ40 523 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 TXNDC5Q8NBS9 432 aaKnown RBP17.14■□□□□ 0.33
SFXN5-220ENST00000490056 EXD1Q8NHP7 514 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 ERLEC1Q96DZ1 483 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 HMCESQ96FZ2 354 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 HES6Q96HZ4 224 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 LRRC19Q9H756 370 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 ATP13A1Q9HD20 1204 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 CACNA2D2Q9NY47 1150 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 THAP10Q9P2Z0 257 aaPredicted RBP17.14■□□□□ 0.33
SFXN5-220ENST00000490056 VPS51Q9UID3 782 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 ERVW-1Q9UQF0 538 aa17.14■□□□□ 0.33
SFXN5-220ENST00000490056 CHD5Q8TDI0 1954 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 MIF4GDA9UHW6 222 aaKnown RBP17.13■□□□□ 0.33
SFXN5-220ENST00000490056 SGK1O00141 431 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 CBX4O00257 560 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 ZMPSTE24O75844 475 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 ASLP04424 464 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 PYGMP11217 842 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 AVPR2P30518 371 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 IL12RB1P42701 662 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 NDST2P52849 883 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 YBEYP58557 167 aaPredicted RBP17.13■□□□□ 0.33
SFXN5-220ENST00000490056 ECT2LQ008S8 904 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 MTAPQ13126 283 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 ZNF211Q13398 564 aaPredicted RBP17.13■□□□□ 0.33
SFXN5-220ENST00000490056 FNDC3BQ53EP0 1204 aaKnown RBP17.13■□□□□ 0.33
SFXN5-220ENST00000490056 MEI1Q5TIA1 1274 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 AFMIDQ63HM1 303 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 KAZNQ674X7 775 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 NCBP2-AS2Q69YL0 99 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 LINGO4Q6UY18 593 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 LEKR1Q6ZMV7 388 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 ZNF354CQ86Y25 554 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 RFX6Q8HWS3 928 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 UBL4BQ8N7F7 174 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 ZNF366Q8N895 744 aa17.13■□□□□ 0.33
SFXN5-220ENST00000490056 TRIM58Q8NG06 486 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms