RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 MED7O43513 233 aa16.35■□□□□ 0.21
PLOD3-216ENST00000489927 AFPP02771 609 aaKnown RBP16.35■□□□□ 0.21
PLOD3-216ENST00000489927 MAT2AP31153 395 aaKnown RBP16.35■□□□□ 0.21
PLOD3-216ENST00000489927 RXRGP48443 463 aa16.35■□□□□ 0.21
PLOD3-216ENST00000489927 PLK1P53350 603 aa16.35■□□□□ 0.21
PLOD3-216ENST00000489927 SULT2A1Q06520 285 aa16.35■□□□□ 0.21
PLOD3-216ENST00000489927 TARDBPQ13148 414 aaKnown RBP eCLIP16.35■□□□□ 0.21
PLOD3-216ENST00000489927 PDCLQ13371 301 aa16.35■□□□□ 0.21
PLOD3-216ENST00000489927 HES3Q5TGS1 186 aa16.35■□□□□ 0.21
PLOD3-216ENST00000489927 KANSL1Q7Z3B3 1105 aa16.35■□□□□ 0.21
PLOD3-216ENST00000489927 PRPF39Q86UA1 669 aaKnown RBP16.35■□□□□ 0.21
PLOD3-216ENST00000489927 ATP6V0D2Q8N8Y2 350 aa16.35■□□□□ 0.21
PLOD3-216ENST00000489927 MFSD2AQ8NA29 543 aa16.35■□□□□ 0.21
PLOD3-216ENST00000489927 FAM204AQ9H8W3 233 aa16.35■□□□□ 0.21
PLOD3-216ENST00000489927 UBE2TQ9NPD8 197 aaPredicted RBP16.35■□□□□ 0.21
PLOD3-216ENST00000489927 SLC12A6Q9UHW9 1150 aa16.35■□□□□ 0.21
PLOD3-216ENST00000489927 CTNND2Q9UQB3 1225 aa16.35■□□□□ 0.21
PLOD3-216ENST00000489927 SYNJ2BP-COX16A0A087WUM0 186 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 A0A1B0GVM2 712 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 TCAF2A6NFQ2 919 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 THAP12O43422 761 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 PLRG1O43660 514 aaKnown RBP16.34■□□□□ 0.21
PLOD3-216ENST00000489927 ITPKBP27987 946 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 GNA15P30679 374 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 ABCG1P45844 678 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 SEMG2Q02383 582 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 CENPCQ03188 943 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 POM121L1PQ3SYA9 428 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 ACCSLQ4AC99 568 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 RABGAP1LQ5R372 815 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 TTC39BQ5VTQ0 682 aaPredicted RBP16.34■□□□□ 0.21
PLOD3-216ENST00000489927 FBXL22Q6P050 247 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 FBXL19Q6PCT2 694 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 FOXR2Q6PJQ5 311 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 OXR1Q8N573 874 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 OR52K2Q8NGK3 314 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 PIP4K2CQ8TBX8 421 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 OR8D1Q8WZ84 308 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 ALG14Q96F25 216 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 KDM4CQ9H3R0 1056 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 DDIT4Q9NX09 232 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 COX16Q9P0S2 106 aa16.34■□□□□ 0.21
PLOD3-216ENST00000489927 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.34■□□□□ 0.21
PLOD3-216ENST00000489927 BICDL2A1A5D9 508 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 EIF4E1BA6NMX2 242 aaKnown RBP16.33■□□□□ 0.2
PLOD3-216ENST00000489927 SLC7A4O43246 635 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 TLX3O43711 291 aaPredicted RBP16.33■□□□□ 0.2
PLOD3-216ENST00000489927 SLC2A3P11169 496 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 CCR1P32246 355 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 IRAK1P51617 712 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 MARSP56192 900 aaKnown RBP16.33■□□□□ 0.2
PLOD3-216ENST00000489927 STX17P56962 302 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 CDK17Q00537 523 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 CNTN1Q12860 1018 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 AGBL4Q5VU57 503 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 FAM46CQ5VWP2 391 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 DSG4Q86SJ6 1040 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 IQCHQ86VS3 1027 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 ELOA2Q8IYF1 753 aaPredicted RBP16.33■□□□□ 0.2
PLOD3-216ENST00000489927 DEFB106AQ8N104 65 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 RPRD1AQ96P16 312 aaPredicted RBP16.33■□□□□ 0.2
PLOD3-216ENST00000489927 SLC2A13Q96QE2 648 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 FEM1AQ9BSK4 669 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 SLC25A13Q9UJS0 675 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 PPM1HQ9ULR3 514 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 DMTF1Q9Y222 760 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 AK5Q9Y6K8 562 aa16.33■□□□□ 0.2
PLOD3-216ENST00000489927 ATP9BO43861 1147 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 SDC3O75056 442 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 GNA14O95837 355 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 CKMT2P17540 419 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 NUDT1P36639 197 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 EIF2S3P41091 472 aaKnown RBP16.32■□□□□ 0.2
PLOD3-216ENST00000489927 VASPP50552 380 aaPredicted RBP16.32■□□□□ 0.2
PLOD3-216ENST00000489927 OXCT1P55809 520 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 ILKQ13418 452 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 AUHQ13825 339 aaKnown RBP16.32■□□□□ 0.2
PLOD3-216ENST00000489927 MORC3Q14149 939 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 STAT4Q14765 748 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 GJB7Q6PEY0 223 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 Q6ZVU0 165 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 TRIM69Q86WT6 500 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 WDTC1Q8N5D0 677 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 RNF34Q969K3 372 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 NRSN2Q9GZP1 204 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 VANGL2Q9ULK5 521 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 CA5BQ9Y2D0 317 aa16.32■□□□□ 0.2
PLOD3-216ENST00000489927 BECN2A8MW95 431 aa16.31■□□□□ 0.2
PLOD3-216ENST00000489927 C1QTNF3-AMACRE9PGA6 284 aa16.31■□□□□ 0.2
PLOD3-216ENST00000489927 BIN1O00499 593 aa16.31■□□□□ 0.2
PLOD3-216ENST00000489927 MCF2LO15068 1137 aa16.31■□□□□ 0.2
PLOD3-216ENST00000489927 MAGEC1O60732 1142 aa16.31■□□□□ 0.2
PLOD3-216ENST00000489927 GRAP2O75791 330 aa16.31■□□□□ 0.2
PLOD3-216ENST00000489927 GLI1P08151 1106 aa16.31■□□□□ 0.2
PLOD3-216ENST00000489927 ZNF18P17022 549 aa16.31■□□□□ 0.2
PLOD3-216ENST00000489927 GGCXP38435 758 aa16.31■□□□□ 0.2
PLOD3-216ENST00000489927 OVGP1Q12889 678 aa16.31■□□□□ 0.2
PLOD3-216ENST00000489927 PAK1Q13153 545 aa16.31■□□□□ 0.2
PLOD3-216ENST00000489927 RTP5Q14D33 572 aa16.31■□□□□ 0.2
PLOD3-216ENST00000489927 DLG2Q15700 870 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms