RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 SAP25Q8TEE9 199 aa12.12□□□□□ -0.47
ACTN4-206ENST00000489451 GANCQ8TET4 914 aa12.12□□□□□ -0.47
ACTN4-206ENST00000489451 ELF4Q99607 663 aaPredicted RBP12.12□□□□□ -0.47
ACTN4-206ENST00000489451 ACE2Q9BYF1 805 aaPredicted RBP12.12□□□□□ -0.47
ACTN4-206ENST00000489451 THAP9Q9H5L6 903 aa12.12□□□□□ -0.47
ACTN4-206ENST00000489451 SIX2Q9NPC8 291 aa12.12□□□□□ -0.47
ACTN4-206ENST00000489451 NCKAP1Q9Y2A7 1128 aa12.12□□□□□ -0.47
ACTN4-206ENST00000489451 HECTD1Q9ULT8 2610 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 TYW5A2RUC4 315 aaKnown RBP12.11□□□□□ -0.47
ACTN4-206ENST00000489451 TRABD2BA6NFA1 517 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 F5H5T6 163 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 CAPN9O14815 690 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 GRAP2O75791 330 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 ERBB2P04626 1255 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 PNMA6AP0CW24 399 aaPredicted RBP12.11□□□□□ -0.47
ACTN4-206ENST00000489451 TFE3P19532 575 aaPredicted RBP12.11□□□□□ -0.47
ACTN4-206ENST00000489451 C5AR1P21730 350 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 CCR5P51681 352 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 NXPH1P58417 271 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 DNAJC3Q13217 504 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 ELAVL3Q14576 367 aaKnown RBP12.11□□□□□ -0.47
ACTN4-206ENST00000489451 SUZ12Q15022 739 aaKnown RBP12.11□□□□□ -0.47
ACTN4-206ENST00000489451 PTPN20Q4JDL3 420 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 AGBL4Q5VU57 503 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 FAM183BPQ6ZVS7 135 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 ZNF683Q8IZ20 524 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 OR14C36Q8NHC7 312 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 SHC3Q92529 594 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 CRELD1Q96HD1 420 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 OMDQ99983 421 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 CLMPQ9H6B4 373 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.11□□□□□ -0.47
ACTN4-206ENST00000489451 HS3ST4Q9Y661 456 aa12.11□□□□□ -0.47
ACTN4-206ENST00000489451 SYNJ2BP-COX16A0A087WUM0 186 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 A0A1B0GVM2 712 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 TCAF2A6NFQ2 919 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 LRRC72A6NJI9 287 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 MED7O43513 233 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 ATP9BO43861 1147 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 RNASEH1O60930 286 aaKnown RBP12.1□□□□□ -0.47
ACTN4-206ENST00000489451 RTN2O75298 545 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 MOCS3O95396 460 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 ADH1BP00325 375 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 IL1BP01584 269 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 CTSLP07711 333 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 PON1P27169 355 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 CD38P28907 300 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 EPHA8P29322 1005 aaPredicted RBP12.1□□□□□ -0.47
ACTN4-206ENST00000489451 ACADVLP49748 655 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 VASPP50552 380 aaPredicted RBP12.1□□□□□ -0.47
ACTN4-206ENST00000489451 C21orf59P57076 290 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 TAS2R38P59533 333 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 CYP4F3Q08477 520 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 BNIP3Q12983 259 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 AUHQ13825 339 aaKnown RBP12.1□□□□□ -0.47
ACTN4-206ENST00000489451 ARHGAP44Q17R89 818 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 C5orf22Q49AR2 442 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 CCDC157Q569K6 752 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 SFMBT2Q5VUG0 894 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.1□□□□□ -0.47
ACTN4-206ENST00000489451 SND1Q7KZF4 910 aaKnown RBP eCLIP12.1□□□□□ -0.47
ACTN4-206ENST00000489451 ATP6V0D2Q8N8Y2 350 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 C1orf131Q8NDD1 294 aaKnown RBP12.1□□□□□ -0.47
ACTN4-206ENST00000489451 TSC1Q92574 1164 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 PSMB7Q99436 277 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 FAM204AQ9H8W3 233 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 ASNSD1Q9NWL6 643 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 DDIT4Q9NX09 232 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 COX16Q9P0S2 106 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 APEX2Q9UBZ4 518 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 FTSJ1Q9UET6 329 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 VANGL2Q9ULK5 521 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 PCDHGC3Q9UN70 934 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 CA5BQ9Y2D0 317 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 SNX10Q9Y5X0 201 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 DOCK4Q8N1I0 1966 aa12.1□□□□□ -0.47
ACTN4-206ENST00000489451 KALRNO60229 2985 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 URB1O60287 2271 aaKnown RBP12.09□□□□□ -0.47
ACTN4-206ENST00000489451 ENC1O14682 589 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 ATXN7O15265 892 aaPredicted RBP12.09□□□□□ -0.47
ACTN4-206ENST00000489451 PLRG1O43660 514 aaKnown RBP12.09□□□□□ -0.47
ACTN4-206ENST00000489451 DAB1O75553 588 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 CNTN5O94779 1100 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 MT-CO1P00395 513 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 GLI1P08151 1106 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 CCR1P32246 355 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 CLCN1P35523 988 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 SLC12A1Q13621 1099 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 POM121L1PQ3SYA9 428 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 ALFQ53S48 1182 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 Q6ZVU0 165 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 ENOSF1Q7L5Y1 443 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 GALNT15Q8N3T1 639 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 SERAC1Q96JX3 654 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 PPP1R13BQ96KQ4 1090 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 SPAG5Q96R06 1193 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 FEM1AQ9BSK4 669 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 TRIM62Q9BVG3 475 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 PLCB1Q9NQ66 1216 aa12.09□□□□□ -0.47
ACTN4-206ENST00000489451 AASDHPPTQ9NRN7 309 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms