RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 PLEKHD1A6NEE1 506 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 HMX3A6NHT5 357 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 MYMKA6NI61 221 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 M0QZQ0 153 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 ZC3H11AO75152 810 aaKnown RBP eCLIP4.82□□□□□ -1.64
ITGB1-214ENST00000488427 PEX14O75381 377 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 TULP3O75386 442 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 TCEA3O75764 348 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 NFATC1O95644 943 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 TOP3BO95985 862 aaKnown RBP4.82□□□□□ -1.64
ITGB1-214ENST00000488427 TNNT1P13805 278 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 SOX2P48431 317 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 ALDH7A1P49419 539 aaKnown RBP4.82□□□□□ -1.64
ITGB1-214ENST00000488427 RCAN1P53805 252 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 GALNT1Q10472 559 aaPredicted RBP4.82□□□□□ -1.64
ITGB1-214ENST00000488427 GAB1Q13480 694 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 ETFDHQ16134 617 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 Q4G0T1 1027 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 TTC22Q5TAA0 569 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 ZNF474Q6S9Z5 364 aaPredicted RBP4.82□□□□□ -1.64
ITGB1-214ENST00000488427 TRAPPC11Q7Z392 1133 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 C1QL2Q7Z5L3 287 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 IGFN1Q86VF2 1251 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 GALNT15Q8N3T1 639 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 PAQR4Q8N4S7 273 aaPredicted RBP4.82□□□□□ -1.64
ITGB1-214ENST00000488427 ARFGAP1Q8N6T3 406 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 FSIP1Q8NA03 581 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 SLC2A12Q8TD20 617 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 OTUD7AQ8TE49 926 aaPredicted RBP4.82□□□□□ -1.64
ITGB1-214ENST00000488427 NPAS1Q99742 590 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 MYLK2Q9H1R3 596 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 MAGEH1Q9H213 219 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 POT1Q9NUX5 634 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 MTMR4Q9NYA4 1195 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 AGO2Q9UKV8 859 aaKnown RBP4.82□□□□□ -1.64
ITGB1-214ENST00000488427 HS3ST3B1Q9Y662 390 aa4.82□□□□□ -1.64
ITGB1-214ENST00000488427 COPG1Q9Y678 874 aaKnown RBP4.82□□□□□ -1.64
ITGB1-214ENST00000488427 PRDM15P57071 1507 aaPredicted RBP4.82□□□□□ -1.64
ITGB1-214ENST00000488427 TNS2Q63HR2 1409 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 ZNF521Q96K83 1311 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 FAM90A18PA6NE21 464 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 FAM90A16PA6NEW6 464 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 FAM90A9PA6NNJ1 464 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 FAM90A5PA8MXJ8 464 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 HLA-DQA2P01906 255 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 TFRCP02786 760 aaKnown RBP4.81□□□□□ -1.64
ITGB1-214ENST00000488427 ALDOCP09972 364 aaKnown RBP4.81□□□□□ -1.64
ITGB1-214ENST00000488427 RFPL3SP0C7P2 107 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 FAM90A15PP0C7V4 464 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 FAM90A14PP0C7W9 464 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 CST5P28325 142 aaPredicted RBP4.81□□□□□ -1.64
ITGB1-214ENST00000488427 CIITAP33076 1130 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 CHKAP35790 457 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 AARSP49588 968 aaKnown RBP eCLIP4.81□□□□□ -1.64
ITGB1-214ENST00000488427 SRSF1Q07955 248 aaKnown RBP eCLIP4.81□□□□□ -1.64
ITGB1-214ENST00000488427 GOLGA8FQ08AF8 430 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 KLF9Q13886 244 aaPredicted RBP4.81□□□□□ -1.64
ITGB1-214ENST00000488427 GALNT3Q14435 633 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 RABEP1Q15276 862 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 RBMS2Q15434 407 aaKnown RBP4.81□□□□□ -1.64
ITGB1-214ENST00000488427 TTC39AQ5SRH9 613 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 C10orf62Q5T681 223 aaPredicted RBP4.81□□□□□ -1.64
ITGB1-214ENST00000488427 ANKRD45Q5TZF3 282 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 SULT6B1Q6IMI4 303 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 ZNF425Q6IV72 752 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 C11orf87Q6NUJ2 197 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 ANKS1BQ7Z6G8 1248 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 TFAP2DQ7Z6R9 452 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 PIM3Q86V86 326 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 FAM185AQ8N0U4 392 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 SCNM1Q9BWG6 230 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 MOV10Q9HCE1 1003 aaKnown RBP4.81□□□□□ -1.64
ITGB1-214ENST00000488427 DECR2Q9NUI1 292 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 ELOVL5Q9NYP7 299 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 RNF7Q9UBF6 113 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 SLC25A13Q9UJS0 675 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 DAPP1Q9UN19 280 aa4.81□□□□□ -1.64
ITGB1-214ENST00000488427 CFAP65Q6ZU64 1925 aaKnown RBP4.81□□□□□ -1.64
ITGB1-214ENST00000488427 NKTRP30414 1462 aaKnown RBP4.81□□□□□ -1.64
ITGB1-214ENST00000488427 UBR1Q8IWV7 1749 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.8□□□□□ -1.64
ITGB1-214ENST00000488427 TNS1Q9HBL0 1735 aaKnown RBP4.8□□□□□ -1.64
ITGB1-214ENST00000488427 KIAA1210Q9ULL0 1709 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 C16orf96A6NNT2 1141 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 MCIDASD6RGH6 385 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 MSI1O43347 362 aaKnown RBP4.8□□□□□ -1.64
ITGB1-214ENST00000488427 KIF1CO43896 1103 aaKnown RBP4.8□□□□□ -1.64
ITGB1-214ENST00000488427 UGDHO60701 494 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 SYF2O95926 243 aaKnown RBP4.8□□□□□ -1.64
ITGB1-214ENST00000488427 SCP2P22307 547 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 TBXAS1P24557 533 aaPredicted RBP4.8□□□□□ -1.64
ITGB1-214ENST00000488427 CHRNA5P30532 468 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 CCT4P50991 539 aaKnown RBP4.8□□□□□ -1.64
ITGB1-214ENST00000488427 FOXL2P58012 376 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 ALKBH1Q13686 389 aaKnown RBP4.8□□□□□ -1.64
ITGB1-214ENST00000488427 PAPD7Q5XG87 772 aaKnown RBP4.8□□□□□ -1.64
ITGB1-214ENST00000488427 CCDC174Q6PII3 467 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 GLCCI1Q86VQ1 547 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 KLBQ86Z14 1044 aa4.8□□□□□ -1.64
ITGB1-214ENST00000488427 ADGRF3Q8IZF5 1079 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms