RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 SMYD5Q6GMV2 418 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 DCLRE1AQ6PJP8 1040 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 PBXIP1Q96AQ6 731 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 RMDN2Q96LZ7 410 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 HACD3Q9P035 362 aa12.04□□□□□ -0.48
TRA2B-214ENST00000487615 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.04□□□□□ -0.48
TRA2B-214ENST00000487615 UNCXA6NJT0 531 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 CRTAMO95727 393 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 SCNN1AP37088 669 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 CCDC15Q0P6D6 951 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 BNIP1Q12981 228 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 MTA1Q13330 715 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 BRMS1LQ5PSV4 323 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 NEPROQ6NW34 567 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 POU5F2Q8N7G0 328 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 MIPOL1Q8TD10 442 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 DTLQ9NZJ0 730 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 CD274Q9NZQ7 290 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 SORCS3Q9UPU3 1222 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 C15orf41Q9Y2V0 281 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 SRP72O76094 671 aaKnown RBP12.03□□□□□ -0.48
TRA2B-214ENST00000487615 RHOCP08134 193 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 HMOX2P30519 316 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 CLCNKBP51801 687 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 ATXN3P54252 364 aaPredicted RBP12.03□□□□□ -0.48
TRA2B-214ENST00000487615 WDR4P57081 412 aaKnown RBP12.03□□□□□ -0.48
TRA2B-214ENST00000487615 ABCE1P61221 599 aaKnown RBP12.03□□□□□ -0.48
TRA2B-214ENST00000487615 CDH18Q13634 790 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 CYLC2Q14093 348 aaPredicted RBP12.03□□□□□ -0.48
TRA2B-214ENST00000487615 PTRHD1Q6GMV3 140 aaKnown RBP12.03□□□□□ -0.48
TRA2B-214ENST00000487615 LRRC49Q8IUZ0 686 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 TRIML2Q8N7C3 387 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 NAF1Q96HR8 494 aaKnown RBP12.03□□□□□ -0.48
TRA2B-214ENST00000487615 LPIN3Q9BQK8 851 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 C12orf65Q9H3J6 166 aaKnown RBP12.03□□□□□ -0.48
TRA2B-214ENST00000487615 MYH9P35579 1960 aaKnown RBP12.03□□□□□ -0.48
TRA2B-214ENST00000487615 FAM95CA0A1B0GW59 222 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 FKBP6O75344 327 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 SOAT2O75908 522 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 STAU1O95793 577 aaKnown RBP12.03□□□□□ -0.48
TRA2B-214ENST00000487615 L1CAMP32004 1257 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 GABRB2P47870 512 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 FLT3LGP49771 235 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 RGS4P49798 205 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 NRLP54845 237 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 TEX44Q53QW1 395 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 OLFML1Q6UWY5 402 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 CDC26Q8NHZ8 85 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 SLC35F5Q8WV83 523 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 PCED1BQ96HM7 432 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 ANKRD27Q96NW4 1050 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 CDK5RAP1Q96SZ6 601 aaKnown RBP12.03□□□□□ -0.48
TRA2B-214ENST00000487615 RNPEPL1Q9HAU8 725 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 CDHR5Q9HBB8 845 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 FBXO6Q9NRD1 293 aaPredicted RBP12.03□□□□□ -0.48
TRA2B-214ENST00000487615 LATS2Q9NRM7 1088 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 PADI3Q9ULW8 664 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 EMC10Q5UCC4 262 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 RHBDF2Q6PJF5 856 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 EFL1Q7Z2Z2 1120 aaKnown RBP12.03□□□□□ -0.48
TRA2B-214ENST00000487615 DEFB107AQ8IZN7 70 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 WDTC1Q8N5D0 677 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 SLC9A7Q96T83 725 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 MMADHCQ9H3L0 296 aaPredicted RBP12.03□□□□□ -0.48
TRA2B-214ENST00000487615 CXorf56Q9H5V9 222 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 SYTL2Q9HCH5 934 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 TRMT6Q9UJA5 497 aaKnown RBP12.03□□□□□ -0.48
TRA2B-214ENST00000487615 SH3BP1Q9Y3L3 701 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 DLEC1Q9Y238 1755 aa12.03□□□□□ -0.48
TRA2B-214ENST00000487615 DCXO43602 365 aa12.02□□□□□ -0.48
TRA2B-214ENST00000487615 BPGMP07738 259 aa12.02□□□□□ -0.48
TRA2B-214ENST00000487615 NDUFV1P49821 464 aa12.02□□□□□ -0.48
TRA2B-214ENST00000487615 SCNN1BP51168 640 aa12.02□□□□□ -0.48
TRA2B-214ENST00000487615 NOMO2Q5JPE7 1267 aa12.02□□□□□ -0.48
TRA2B-214ENST00000487615 BNC2Q6ZN30 1099 aaPredicted RBP12.02□□□□□ -0.48
TRA2B-214ENST00000487615 SLC22A9Q8IVM8 553 aa12.02□□□□□ -0.48
TRA2B-214ENST00000487615 KAT2BQ92831 832 aa12.02□□□□□ -0.48
TRA2B-214ENST00000487615 FCRL2Q96LA5 508 aaPredicted RBP12.02□□□□□ -0.48
TRA2B-214ENST00000487615 SNX15Q9NRS6 342 aa12.02□□□□□ -0.48
TRA2B-214ENST00000487615 CNTN3Q9P232 1028 aa12.02□□□□□ -0.48
TRA2B-214ENST00000487615 VTI1BQ9UEU0 232 aa12.02□□□□□ -0.48
TRA2B-214ENST00000487615 WNK3Q9BYP7 1800 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 TCRBV7S3A2A0A539 114 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 MYBPHLA2RUH7 354 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 DNAJC6O75061 913 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 VPS26AO75436 327 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 SNAI1O95863 264 aaPredicted RBP12.02□□□□□ -0.49
TRA2B-214ENST00000487615 MYL4P12829 197 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 IL10P22301 178 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 FOXN2P32314 431 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 CRHR1P34998 444 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 SERPINH1P50454 418 aaKnown RBP12.02□□□□□ -0.49
TRA2B-214ENST00000487615 DAOAP59103 153 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 GRB14Q14449 540 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 LAYNQ6UX15 382 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 TMC7Q7Z402 723 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 RELL1Q8IUW5 271 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 JADE3Q92613 823 aa12.02□□□□□ -0.49
TRA2B-214ENST00000487615 USP13Q92995 863 aaPredicted RBP12.02□□□□□ -0.49
TRA2B-214ENST00000487615 FAM136AQ96C01 138 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms